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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00505
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00505
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-161
Domain cluster:
rep: IMGVR_UViG_3300033463_000002-3300033463-Ga0310690_10000036208__D2-182
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gmwA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 55.0 | 5.13e-01 | 100.0% | 80.2% |
| 1gsoA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 37.0 | 4.47e-01 | 100.0% | 96.8% |
| 7by3B01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.59 | 44.0 | 4.85e-01 | 99.3% | 99.1% |
| 1qhwA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 52.0 | 4.19e-01 | 100.0% | 87.0% |
| 1ni5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 49.0 | 4.30e-01 | 100.0% | 60.8% |
| 2k0zA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.57 | 35.0 | 3.94e-01 | 87.8% | 80.0% |
| 2yk4A01 | 3.30.370.20 | Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › | 0.57 | 28.0 | 3.54e-01 | 87.8% | 79.3% |
| 3rotA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 45.0 | 4.69e-01 | 93.2% | 94.9% |
| 5ix8A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 4.36e-01 | 93.9% | 80.5% |
| 3ksmA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 45.0 | 4.50e-01 | 97.3% | 90.0% |
| 1jbwA02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.52 | 35.0 | 3.94e-01 | 98.0% | 89.3% |
| 2z5lA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 47.0 | 3.36e-01 | 100.0% | 44.6% |
| 6jdbA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 40.0 | 3.97e-01 | 80.3% | 100.0% |
| 1wz2A04 | 3.30.2320.20 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › Class I aminoacyl-tRNA synthetases (RS) | 0.52 | 31.0 | 3.69e-01 | 91.8% | 94.3% |
| 4lnuB01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.52 | 45.0 | 3.77e-01 | 95.9% | 92.3% |
| 5kbpA01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.51 | 45.0 | 3.70e-01 | 98.0% | 73.0% |
| 1ni4A00 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.50 | 44.0 | 3.32e-01 | 95.2% | 58.6% |
| 6l1kA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 44.0 | 4.14e-01 | 96.6% | 92.2% |
| 3l12B00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.50 | 44.0 | 3.62e-01 | 100.0% | 79.0% |
| 2q0tB01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.50 | 39.0 | 3.34e-01 | 82.3% | 87.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077381 | 2006.1.1.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like | 0.69 | 50.0 | 4.92e-01 | 100.0% | 69.4% |
| 3388328 | 2005.1.1.22 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueH | 0.61 | 54.0 | 4.67e-01 | 100.0% | 62.7% |
| 4970456 | 2005.1.1.22 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueH | 0.60 | 51.0 | 4.67e-01 | 100.0% | 70.3% |
| 167219 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.57 | 35.0 | 3.94e-01 | 87.8% | 80.0% |
| 4978621 | 7601.1.1.2 ↗ | a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 | 0.56 | 47.0 | 3.87e-01 | 91.2% | 67.4% |
| 3227940 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 49.0 | 4.20e-01 | 96.6% | 68.5% |
| 5047847 | 2006.1.1.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like | 0.55 | 49.0 | 4.82e-01 | 100.0% | 90.3% |
| 3962916 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 40.0 | 4.04e-01 | 76.9% | 99.3% |
| 3984005 | 129.1.1.51 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › ADH_zinc_N | 0.55 | 45.0 | 3.67e-01 | 89.8% | 59.2% |
| 5063565 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.54 | 38.0 | 3.10e-01 | 95.9% | 38.1% |
| 3328948 | 246.2.1.3 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,Metallophos_C | 0.53 | 46.0 | 3.63e-01 | 100.0% | 84.1% |
| 4510155 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.52 | 41.0 | 4.20e-01 | 81.6% | 95.7% |
| 3595424 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 47.0 | 3.60e-01 | 100.0% | 88.0% |
| 3956472 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 43.0 | 4.34e-01 | 100.0% | 89.7% |
| 5076354 | 7601.1.1.2 ↗ | a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 | 0.52 | 47.0 | 3.69e-01 | 100.0% | 53.8% |
| 4013467 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.51 | 46.0 | 3.64e-01 | 100.0% | 64.7% |