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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00521
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00521
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-145
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10825.14 best | DUF2752 | 71.1 | 9.00e-20 | 50.0% | 100.0% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 37.0 | 4.09e-01 | 83.7% | 92.2% |
| 6h5hA00 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.53 | 32.0 | 3.71e-01 | 90.8% | 83.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941960 | 5086.1.1.86 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YBHG | 0.55 | 37.0 | 3.48e-01 | 81.6% | 55.2% |
| 3546332 | 627.1.1.4 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › PF26202 | 0.52 | 41.0 | 3.49e-01 | 89.8% | 49.4% |
| 3276886 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.52 | 41.0 | 4.08e-01 | 87.8% | 82.0% |