←Back to structures
S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00531
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00531
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-178
Domain cluster:
rep: IMGVR_UViG_3300006876_000060-3300006876-Ga0079217_1000011916__D27-184
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.61 | 19.0 | 3.53e-01 | 72.4% | 100.0% |
| 1rv9A00 | 3.60.140.10 | Alpha Beta › 4-Layer Sandwich › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases | 0.59 | 46.0 | 3.92e-01 | 82.8% | 84.7% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.59 | 32.0 | 3.64e-01 | 93.1% | 68.8% |
| 2l03A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.55 | 28.0 | 3.68e-01 | 90.3% | 93.2% |
| 1hqz800 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 38.0 | 4.02e-01 | 93.1% | 80.3% |
| 3d3oA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 46.0 | 4.37e-01 | 93.8% | 85.2% |
| 1ks6A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 34.0 | 3.88e-01 | 95.9% | 93.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4010712 | 2492.1.1.31 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › DUF4329 | 0.76 | 64.0 | 6.77e-01 | 96.6% | 98.5% |
| 4930766 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.59 | 46.0 | 4.81e-01 | 93.1% | 88.1% |
| 184803 | 6029.1.1.1 ↗ | beta meanders › Hemin uptake protein hemP › Hemin uptake protein hemP › Hemin uptake protein hemP › hemP | 0.58 | 20.0 | 2.96e-01 | 90.3% | 68.3% |
| 4540762 | 304.150.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA | 0.55 | 35.0 | 4.11e-01 | 98.6% | 90.4% |
| 4055099 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 27.0 | 3.52e-01 | 84.8% | 86.3% |
| 4054504 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 32.0 | 3.79e-01 | 95.2% | 92.2% |
| 3821500 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 34.0 | 3.02e-01 | 84.1% | 44.9% |
| 4051669 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 27.0 | 3.26e-01 | 84.8% | 73.7% |
| 3218676 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 33.0 | 3.81e-01 | 100.0% | 86.7% |
| 4227821 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.52 | 32.0 | 3.00e-01 | 73.8% | 48.6% |
| 3534065 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.51 | 29.0 | 3.68e-01 | 91.7% | 96.5% |
| 2813818 | 3984.1.1.1 ↗ | beta sandwiches › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpes_U34 | 0.50 | 40.0 | 3.71e-01 | 100.0% | 67.0% |
| 3971075 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.50 | 44.0 | 4.15e-01 | 97.9% | 92.8% |