←Back to structures

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00543

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00543

Identity

Kingdom:
phage

Quality

65.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 127-192
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pnrA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.74 66.0 4.45e-01 100.0% 48.3%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.86e-01 84.8% 96.7%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 5.68e-01 87.9% 93.9%
1vajA02 3.30.1490.150 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Hypothetical protein ph0010; domain 2 0.70 60.0 5.80e-01 95.5% 100.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.37e-01 84.8% 90.9%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.69 59.0 5.12e-01 97.0% 71.6%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 5.32e-01 74.2% 100.0%
2w3sA04 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.67 59.0 4.95e-01 100.0% 90.4%
1t3qC02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.67 59.0 4.89e-01 100.0% 89.0%
1ffvC03 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.66 58.0 4.88e-01 100.0% 92.1%
4zohB02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.66 58.0 4.95e-01 100.0% 91.7%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.65 56.0 4.81e-01 95.5% 100.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.72e-01 87.9% 86.9%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.64 55.0 4.73e-01 97.0% 98.1%
7nz1G01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.63 49.0 4.33e-01 84.8% 100.0%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.62 50.0 4.67e-01 89.4% 100.0%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.61 48.0 4.01e-01 86.4% 100.0%
1g8kA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.61 49.0 3.91e-01 89.4% 85.2%
2hc8A00 2.70.150.10 Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A 0.60 41.0 3.49e-01 98.5% 41.6%
1h0hA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.60 47.0 3.49e-01 86.4% 73.3%
2ki8A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.60 49.0 4.10e-01 93.9% 88.8%
2e7zA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.60 48.0 3.61e-01 87.9% 83.2%
1u3eM02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.20e-01 74.2% 82.4%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.60 48.0 4.19e-01 87.9% 99.0%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.60 46.0 3.50e-01 86.4% 87.6%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 42.0 3.39e-01 74.2% 41.3%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.59 45.0 3.70e-01 87.9% 68.8%
8e9gG01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.59 45.0 3.95e-01 83.3% 100.0%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.59 48.0 4.49e-01 93.9% 100.0%
2d8bA01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.58 42.0 3.43e-01 80.3% 70.7%
1fu0A00 3.30.1340.10 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like 0.58 51.0 4.71e-01 100.0% 75.9%
2rftA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.58 52.0 3.51e-01 100.0% 67.4%
3myxA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 43.0 3.65e-01 97.0% 47.0%
3orqA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.58 47.0 4.79e-01 97.0% 100.0%
2wfpA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 43.0 3.84e-01 98.5% 55.1%
2pq0A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.57 46.0 4.10e-01 90.9% 93.0%
8e7cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 39.0 3.67e-01 71.2% 69.1%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 50.0 3.88e-01 100.0% 58.2%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.56 45.0 4.00e-01 90.9% 60.4%
1yn3A00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 48.0 4.25e-01 98.5% 91.8%
1jm1A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.55 43.0 3.20e-01 90.9% 93.1%
2oviA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.55 43.0 3.41e-01 90.9% 62.7%
4tm5A01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.55 38.0 3.04e-01 72.7% 99.2%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 39.0 3.24e-01 78.8% 88.9%
5v6rA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 45.0 3.95e-01 97.0% 82.6%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.54 37.0 3.59e-01 71.2% 72.7%
3hmzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 42.0 3.20e-01 92.4% 93.2%
1r9fA01 3.30.390.180 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 0.54 41.0 3.59e-01 86.4% 70.6%
6x5vA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.88e-01 90.9% 82.3%
4jf6A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 36.0 2.58e-01 72.7% 81.2%
1m2gA02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.53 41.0 3.76e-01 89.4% 74.2%
3glkA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.53 41.0 4.29e-01 90.9% 100.0%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 44.0 3.76e-01 98.5% 77.8%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.53 42.0 3.25e-01 93.9% 58.7%
3fzqA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 42.0 3.56e-01 90.9% 89.6%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 37.0 2.97e-01 78.8% 84.1%
2orzA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 45.0 3.50e-01 100.0% 56.5%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.25e-01 89.4% 84.6%
1loxA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.51 40.0 3.39e-01 84.8% 88.3%
5hr9A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 38.0 3.38e-01 83.3% 72.9%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 39.0 3.10e-01 90.9% 88.3%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 40.0 2.80e-01 89.4% 45.9%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 42.0 3.88e-01 97.0% 79.1%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 39.0 2.94e-01 87.9% 92.9%
1m1hA02 2.60.320.10 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain 0.50 37.0 3.54e-01 81.8% 85.4%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5077562 4.1.2.2 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.73 58.0 5.55e-01 86.4% 86.7%
4280097 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 60.0 6.21e-01 97.0% 100.0%
4432348 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 64.0 6.34e-01 98.5% 95.6%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.72 53.0 5.51e-01 84.8% 86.7%
5004476 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.63e-01 83.3% 86.2%
4451993 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 58.0 6.08e-01 92.4% 100.0%
4499953 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 58.0 6.06e-01 92.4% 100.0%
4941512 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.48e-01 86.4% 82.9%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.70 56.0 5.28e-01 87.9% 78.8%
4658938 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.70 56.0 5.06e-01 87.9% 70.0%
3036710 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 57.0 5.85e-01 90.9% 98.4%
1263519 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.70 54.0 5.55e-01 84.8% 98.4%
4123180 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.70 56.0 5.37e-01 87.9% 82.7%
4342488 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.98e-01 97.0% 100.0%
4163851 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 57.0 5.91e-01 90.9% 100.0%
4151014 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 56.0 5.80e-01 92.4% 100.0%
135648 4.1.1.142 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq_1 0.69 53.0 5.38e-01 84.8% 93.8%
139950 4.1.1.126 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5608 0.68 53.0 5.65e-01 86.4% 100.0%
4975764 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.68 56.0 5.51e-01 89.4% 87.1%
5036621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.61e-01 84.8% 100.0%
4287411 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.68 57.0 5.35e-01 93.9% 87.5%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.67 55.0 5.44e-01 89.4% 92.9%
7151 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.67 59.0 4.34e-01 100.0% 61.0%
4982667 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.67 59.0 4.40e-01 100.0% 61.8%
5076492 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.67 59.0 4.28e-01 100.0% 56.8%
4944194 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.66 58.0 4.26e-01 100.0% 57.8%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.66 53.0 5.34e-01 89.4% 95.4%
5063169 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.66 58.0 4.40e-01 100.0% 64.4%
4961681 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.65 57.0 4.27e-01 100.0% 63.5%
4953054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.00e-01 89.4% 82.7%
3387378 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 51.0 4.77e-01 87.9% 92.9%
4930010 1.1.7.141 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin 0.64 57.0 5.04e-01 98.5% 87.4%
4944045 4.17.1.2 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.64 52.0 5.10e-01 89.4% 94.3%
4938514 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.63 49.0 4.53e-01 84.8% 75.3%
4957350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 5.09e-01 90.9% 95.4%
5057445 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.62 50.0 4.68e-01 95.5% 70.6%
5041263 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.62 51.0 4.69e-01 90.9% 100.0%
3945800 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 50.0 3.76e-01 89.4% 73.9%
4951261 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 48.0 3.99e-01 84.8% 61.7%
4998900 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 50.0 4.32e-01 87.9% 95.0%
4943103 1.1.2.45 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 0.61 49.0 4.52e-01 87.9% 100.0%
4947745 1.1.2.45 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 0.61 51.0 4.68e-01 95.5% 100.0%
5055312 221.1.3.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain 0.61 52.0 4.01e-01 97.0% 74.2%
4946804 1.1.2.44 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N 0.61 49.0 4.60e-01 90.9% 100.0%
4052010 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.61 50.0 3.83e-01 90.9% 79.4%
3977485 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.61 49.0 3.69e-01 87.9% 90.6%
3286603 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.60 49.0 3.90e-01 90.9% 87.1%
4954284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.67e-01 89.4% 91.7%
5071939 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.60 42.0 3.20e-01 74.2% 32.7%
4665979 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 48.0 3.94e-01 87.9% 94.4%
4943394 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.60 48.0 3.92e-01 87.9% 93.5%
4362257 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.59 47.0 4.09e-01 87.9% 99.0%
3634472 376.1.6.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR 0.59 40.0 4.06e-01 89.4% 72.3%
33 1.1.2.15 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PEX-2N 0.59 48.0 4.49e-01 93.9% 100.0%
2496895 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.14e-01 89.4% 72.2%
5016426 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.58 41.0 3.11e-01 74.2% 33.3%
3260404 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 50.0 3.78e-01 100.0% 58.2%
3415385 11.2.1.31 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF4788 0.56 44.0 3.49e-01 84.8% 53.3%
5012954 632.2.1.40 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF515 0.56 44.0 3.46e-01 86.4% 67.9%
4125768 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.56 40.0 3.17e-01 78.8% 90.7%
3672526 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 47.0 3.94e-01 100.0% 92.8%
3953421 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.55 41.0 3.31e-01 83.3% 88.6%
5013898 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.55 47.0 3.51e-01 100.0% 40.0%
3723736 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.67e-01 92.4% 75.7%
3198563 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 43.0 3.78e-01 92.4% 79.0%
4963864 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.53 40.0 3.26e-01 83.3% 97.0%
2429452 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.52 39.0 3.22e-01 83.3% 89.4%
5021743 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 3.89e-01 98.5% 89.5%
3702365 4020.1.1.0 ↗ a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.52 41.0 3.15e-01 87.9% 98.7%
4654070 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.51 43.0 3.49e-01 98.5% 77.8%
3288278 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.51 39.0 3.23e-01 89.4% 48.9%
4949994 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.51e-01 95.5% 82.5%
4962625 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.50 37.0 2.99e-01 83.3% 88.7%
3609901 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.50 39.0 2.98e-01 84.8% 49.4%
D2 medium residues 6-122
PDB