←Back to structures
S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00548
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00548
Identity
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-78
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zhxA04 | 3.30.70.3490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.75 | 53.0 | 4.08e-01 | 72.9% | 35.4% |
| 3craB01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.70 | 59.0 | 5.31e-01 | 98.3% | 73.3% |
| 3lcvB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 56.0 | 3.81e-01 | 91.5% | 96.5% |
| 4ebjA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.66 | 52.0 | 4.08e-01 | 88.1% | 53.1% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.64 | 57.0 | 4.30e-01 | 100.0% | 71.2% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.60 | 48.0 | 4.11e-01 | 100.0% | 54.9% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 51.0 | 3.84e-01 | 98.3% | 73.9% |
| 1gw5A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 46.0 | 2.69e-01 | 89.8% | 17.6% |
| 4hs2A00 | 1.25.40.420 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 46.0 | 4.50e-01 | 88.1% | 95.3% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3274841 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.81 | 58.0 | 4.34e-01 | 76.3% | 35.7% |
| 3542527 | 5020.1.1.8 ↗ | extended segments › Subunit VIII of photosystem I reaction centre, PsaI › Subunit VIII of photosystem I reaction centre, PsaI › Subunit VIII of photosystem I reaction centre, PsaI › TB2_DP1_HVA22 | 0.78 | 55.0 | 4.79e-01 | 72.9% | 50.6% |
| 3906647 | 5043.1.1.12 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like › TB2_DP1_HVA22 | 0.77 | 54.0 | 4.71e-01 | 72.9% | 50.6% |
| 3742136 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 48.0 | 4.51e-01 | 74.6% | 60.0% |
| 3275377 | 109.27.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK | 0.58 | 46.0 | 4.49e-01 | 84.7% | 93.8% |
| 3775792 | 109.27.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK | 0.56 | 49.0 | 3.83e-01 | 100.0% | 53.8% |
| 4304744 | 109.4.1.206 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO | 0.54 | 46.0 | 3.64e-01 | 94.9% | 55.0% |
| 3618183 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.53 | 41.0 | 2.70e-01 | 91.5% | 25.8% |