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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00559
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00559
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-54_155-169
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wzpR03 | 3.30.1920.20 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Phage tail base-plate attachment protein, domain D3 | 0.57 | 31.0 | 2.94e-01 | 91.2% | 43.8% |
D2
high
residues 57-137
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 43.0 | 4.43e-01 | 80.2% | 96.2% |
| 1lqaA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.58 | 48.0 | 3.22e-01 | 93.8% | 58.1% |
| 3v3sA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 46.0 | 3.28e-01 | 100.0% | 37.9% |
| 1go3F02 | 6.10.140.10 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 24.0 | 3.06e-01 | 88.9% | 70.2% |
| 4hzuS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.51 | 44.0 | 3.57e-01 | 100.0% | 70.1% |
| 2p0nA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.51 | 39.0 | 3.26e-01 | 87.7% | 93.2% |
| 4cgyA02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.50 | 41.0 | 3.20e-01 | 92.6% | 64.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3450460 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 32.0 | 3.45e-01 | 92.6% | 58.6% |
| 3418714 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.59 | 48.0 | 3.30e-01 | 93.8% | 72.4% |
| 4284807 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.56 | 35.0 | 2.91e-01 | 87.7% | 35.7% |
| 4867516 | 5054.1.1.58 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › YVC1_C | 0.53 | 39.0 | 3.38e-01 | 80.2% | 85.2% |
| 4888868 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.53 | 44.0 | 3.39e-01 | 92.6% | 70.3% |
| 4605395 | 2004.1.1.59 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE | 0.52 | 44.0 | 3.32e-01 | 95.1% | 42.5% |
| 3331999 | 192.18.1.0 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like | 0.51 | 44.0 | 3.26e-01 | 97.5% | 36.4% |