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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00646

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00646

Identity

Kingdom:
phage

Quality

91.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 149-480
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01645.24 best Glu_synthase 285.3 1.20e-84 98.8% 81.0%
CATH (84)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ea0B03 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.93 85.0 7.82e-01 100.0% 76.3%
3sr7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.85 58.0 6.37e-01 100.0% 82.4%
7bsrA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.83 64.0 6.49e-01 100.0% 79.7%
1vcfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.82 63.0 6.70e-01 100.0% 86.9%
1tb3E00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.82 62.0 6.27e-01 100.0% 77.8%
1qcwA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.81 63.0 6.16e-01 100.0% 73.7%
1p0kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.80 59.0 6.19e-01 100.0% 80.7%
3ktsA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.80 45.0 6.08e-01 96.1% 100.0%
1n7kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.77 51.0 6.02e-01 98.5% 92.3%
1hg3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.77 52.0 6.33e-01 95.5% 100.0%
1mzhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.76 51.0 6.18e-01 99.4% 99.1%
3vkjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.76 63.0 6.11e-01 100.0% 77.4%
2a7rD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 59.0 6.12e-01 100.0% 84.2%
6dvhB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 66.0 6.20e-01 100.0% 76.8%
3tsmA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 51.0 5.71e-01 96.4% 85.8%
3b5vA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 49.0 5.69e-01 96.1% 87.9%
3ndoA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 50.0 6.02e-01 98.2% 98.2%
7mftG02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 43.0 4.42e-01 100.0% 59.0%
1ypfA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 56.0 5.95e-01 100.0% 85.4%
4fb7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 51.0 5.73e-01 97.3% 86.5%
1jqxA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 56.0 6.19e-01 100.0% 94.4%
5csrC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 49.0 5.97e-01 98.8% 99.1%
6bfgA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 65.0 6.19e-01 100.0% 80.2%
1eepA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 58.0 6.00e-01 100.0% 85.0%
1y0eA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.73 48.0 5.86e-01 81.6% 97.7%
1wv2A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.73 50.0 5.87e-01 99.7% 98.3%
2oz8A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.72 46.0 5.48e-01 94.3% 90.9%
6bmaA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 51.0 5.76e-01 94.6% 91.5%
1geqB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 52.0 6.05e-01 96.1% 100.0%
1dtnA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.71 45.0 5.37e-01 94.0% 90.4%
1ofdA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 42.0 4.21e-01 100.0% 56.6%
3igsB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 48.0 5.67e-01 85.5% 96.1%
3r2gA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 57.0 5.87e-01 100.0% 86.1%
1vh7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 51.0 5.89e-01 99.1% 98.0%
4n6fA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 50.0 5.78e-01 100.0% 98.3%
2chrA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.70 43.0 5.43e-01 82.2% 99.5%
2ekcB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 53.0 5.98e-01 97.9% 99.6%
3ugvA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.69 45.0 5.28e-01 94.0% 90.7%
1tkkA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.69 46.0 5.32e-01 94.3% 90.2%
1a5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 52.0 5.88e-01 97.9% 99.2%
1znnA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 49.0 5.65e-01 99.1% 96.3%
6b8sA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 56.0 5.63e-01 100.0% 83.0%
1jcjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 50.0 5.68e-01 97.9% 97.2%
2hqoA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 23.0 3.87e-01 80.7% 84.9%
1ep3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 57.0 5.91e-01 100.0% 93.2%
4jgiB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.67 25.0 4.10e-01 92.8% 89.7%
3dg3A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.66 44.0 5.03e-01 94.0% 87.7%
1uumA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 57.0 5.63e-01 100.0% 84.6%
3vk5B00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.66 48.0 5.51e-01 95.2% 98.4%
3lmzA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.64 47.0 5.34e-01 97.3% 96.8%
2z6iA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 58.0 5.98e-01 99.7% 98.1%
4jejA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.64 46.0 5.35e-01 97.6% 100.0%
1gteB05 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 56.0 5.90e-01 100.0% 99.0%
4nicA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 22.0 3.78e-01 80.7% 88.0%
6e0bA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 59.0 5.64e-01 100.0% 84.8%
4ot7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 56.0 5.89e-01 95.2% 98.7%
3oa3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 41.0 4.62e-01 93.1% 82.2%
2qr6A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 58.0 5.71e-01 100.0% 89.4%
4kw2A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.63 45.0 5.26e-01 97.3% 100.0%
2gjlA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 58.0 5.95e-01 100.0% 98.8%
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 24.0 3.87e-01 93.1% 89.8%
3kp1A04 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.62 27.0 4.08e-01 95.8% 91.3%
1zfjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 59.0 5.17e-01 100.0% 85.1%
4r33A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 55.0 5.19e-01 95.5% 79.4%
1uhvA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 57.0 5.69e-01 98.5% 100.0%
1nf7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 59.0 5.19e-01 100.0% 81.7%
3bw3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 58.0 5.72e-01 99.1% 100.0%
1adoA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 56.0 5.46e-01 97.6% 91.5%
3p6lA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.60 46.0 5.12e-01 99.4% 98.9%
5v1qB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 49.0 5.26e-01 89.8% 100.0%
1p6qA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 23.0 3.63e-01 93.4% 89.9%
5o8zB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 27.0 4.03e-01 98.2% 100.0%
3fkfD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 24.0 3.64e-01 96.1% 89.1%
5lsmG00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 55.0 5.56e-01 99.1% 100.0%
6y9tB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 53.0 4.98e-01 97.0% 98.0%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 51.0 5.30e-01 96.4% 100.0%
4grfA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 25.0 3.70e-01 95.8% 92.9%
1flaA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.57 23.0 3.48e-01 89.8% 86.2%
3k9cA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 25.0 3.67e-01 91.6% 94.3%
4lgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 31.0 4.00e-01 95.8% 98.4%
4k36B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 47.0 4.58e-01 93.4% 87.9%
4kq9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 31.0 3.86e-01 89.2% 92.5%
4cczA01 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.52 46.0 4.78e-01 97.9% 97.8%
1jmkC01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 27.0 3.61e-01 74.7% 94.2%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3967358 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 1.00 99.0 8.72e-01 100.0% 75.7%
4032432 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.98 96.0 9.04e-01 100.0% 86.0%
4952247 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.96 89.0 8.25e-01 100.0% 78.3%
None 0.96 90.0 8.26e-01 100.0% 78.3%
4949135 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.94 70.0 7.63e-01 96.4% 87.7%
None 0.94 85.0 7.70e-01 100.0% 72.6%
3495697 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.94 85.0 7.61e-01 100.0% 70.9%
5058965 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.93 88.0 8.09e-01 100.0% 79.5%
5080551 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.93 87.0 8.14e-01 100.0% 81.0%
4033644 2002.1.1.347 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase, Glu_syn_central 0.93 85.0 6.18e-01 100.0% 40.4%
2797931 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.92 84.0 7.66e-01 100.0% 74.5%
4982159 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.92 81.0 7.53e-01 100.0% 75.9%
3603213 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.91 90.0 7.93e-01 100.0% 78.0%
4973024 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.91 90.0 8.27e-01 100.0% 83.7%
None 0.91 89.0 8.03e-01 100.0% 79.1%
None 0.91 89.0 8.29e-01 100.0% 84.1%
4240608 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.91 89.0 8.15e-01 100.0% 81.2%
None 0.91 89.0 7.95e-01 100.0% 77.4%
None 0.88 61.0 6.81e-01 74.1% 85.9%
5070378 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.88 82.0 7.78e-01 100.0% 83.2%
4187744 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.88 85.0 7.67e-01 100.0% 76.9%
4210494 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.88 85.0 7.45e-01 100.0% 71.9%
4991739 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.87 45.0 4.99e-01 100.0% 62.1%
5075507 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.86 64.0 7.01e-01 96.4% 89.8%
4968846 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.85 61.0 6.45e-01 100.0% 80.3%
5058964 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.81 66.0 6.45e-01 100.0% 77.5%
3947471 2002.1.1.130 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › G3P_antiterm 0.80 45.0 6.08e-01 91.9% 100.0%
3592644 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.78 64.0 6.38e-01 100.0% 81.2%
4998990 2002.1.1.70 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.78 73.0 6.82e-01 100.0% 81.5%
None 0.77 67.0 6.45e-01 100.0% 80.5%
4048451 2002.1.1.76 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.77 51.0 6.04e-01 98.5% 92.5%
None 0.76 51.0 6.20e-01 97.3% 100.0%
4053935 2002.1.1.48 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh 0.76 64.0 6.30e-01 100.0% 81.1%
3781568 2002.1.1.48 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh 0.76 63.0 5.89e-01 100.0% 70.7%
3595107 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.76 50.0 5.50e-01 97.6% 79.6%
4479041 2002.1.1.76 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.76 49.0 6.10e-01 97.9% 100.0%
4452864 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.76 51.0 5.51e-01 95.5% 78.6%
None 0.75 51.0 5.78e-01 96.4% 86.9%
3188042 2002.1.1.48 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh 0.75 64.0 5.87e-01 100.0% 69.9%
5000376 2002.1.1.3 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM 0.75 52.0 6.18e-01 98.5% 100.0%
4974753 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.75 51.0 5.74e-01 97.0% 86.0%
None 0.75 66.0 6.14e-01 100.0% 75.9%
2874843 2002.1.1.23 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH 0.74 52.0 5.81e-01 89.2% 87.7%
None 0.73 65.0 6.20e-01 100.0% 80.0%
3431875 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.73 49.0 5.02e-01 97.0% 68.6%
4954757 2002.1.1.48 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh 0.73 68.0 6.38e-01 100.0% 81.5%
4971863 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.73 71.0 6.45e-01 100.0% 82.2%
3952963 2002.1.1.48 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh 0.72 65.0 6.13e-01 100.0% 78.9%
None 0.71 51.0 5.94e-01 92.8% 100.0%
None 0.71 52.0 6.00e-01 94.3% 100.0%
4101336 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.71 52.0 6.00e-01 94.3% 100.0%
3730531 2002.1.1.48 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh 0.71 67.0 6.10e-01 100.0% 76.7%
1291618 2002.1.1.138 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiG 0.70 50.0 5.78e-01 100.0% 97.5%
None 0.70 55.0 6.12e-01 97.9% 100.0%
3643243 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 54.0 5.88e-01 96.7% 94.3%
5040527 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.69 49.0 5.78e-01 97.9% 100.0%
139718 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 53.0 5.97e-01 97.0% 100.0%
4020841 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.69 66.0 5.98e-01 100.0% 77.0%
None 0.69 50.0 5.84e-01 98.2% 100.0%
None 0.69 58.0 6.02e-01 100.0% 92.6%
None 0.69 55.0 6.00e-01 98.8% 97.8%
4120525 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 56.0 6.11e-01 97.9% 100.0%
None 0.68 49.0 5.76e-01 97.9% 100.0%
4204786 2002.1.1.76 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.68 50.0 5.61e-01 97.6% 94.6%
5026527 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.68 57.0 5.99e-01 99.4% 95.0%
None 0.68 57.0 5.96e-01 100.0% 94.1%
4611975 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.67 57.0 5.67e-01 100.0% 84.1%
4959284 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.67 56.0 5.81e-01 100.0% 90.5%
None 0.67 57.0 5.92e-01 100.0% 93.2%
4390217 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.67 53.0 5.86e-01 97.0% 100.0%
5040829 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.67 53.0 5.88e-01 98.2% 100.0%
None 0.67 50.0 5.64e-01 99.4% 96.9%
None 0.67 56.0 5.88e-01 100.0% 94.1%
5077894 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.67 56.0 5.83e-01 99.7% 93.1%
3744342 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.66 58.0 4.90e-01 90.4% 72.0%
4517677 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.66 56.0 5.75e-01 97.3% 91.3%
1242171 2002.1.1.78 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PcrB 0.65 48.0 5.50e-01 95.2% 98.0%
3969425 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 59.0 5.46e-01 93.7% 91.2%
3595276 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 59.0 5.52e-01 100.0% 78.5%
5060345 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.65 57.0 5.85e-01 100.0% 93.5%
4512918 2002.1.1.108 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO 0.64 61.0 5.97e-01 100.0% 99.7%
4928712 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.64 58.0 5.54e-01 100.0% 82.6%
3203536 2002.1.1.108 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO 0.63 60.0 5.79e-01 99.4% 97.1%
1065637 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.63 45.0 5.26e-01 97.3% 100.0%
3973156 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.63 58.0 5.95e-01 100.0% 98.8%
3731160 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.63 58.0 5.68e-01 95.8% 100.0%
4436960 2002.1.1.108 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO 0.63 60.0 5.55e-01 100.0% 89.1%
3727882 2002.1.1.280 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH, NMO 0.62 58.0 5.87e-01 100.0% 97.0%
3668475 2002.1.1.108 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO 0.61 59.0 5.91e-01 99.4% 99.1%
2157312 2002.1.1.108 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO 0.61 58.0 5.52e-01 97.9% 99.2%
4992536 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 47.0 4.78e-01 80.1% 82.5%
5080787 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.60 42.0 4.68e-01 78.3% 87.9%
5024821 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.58 49.0 5.23e-01 95.2% 99.7%
2323965 2002.1.1.125 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,SPASM 0.55 49.0 4.93e-01 93.4% 91.1%
2322645 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 50.0 4.59e-01 98.8% 89.9%
D2 medium residues 16-92
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1o9gA02 1.10.287.540 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.82 46.0 5.97e-01 71.4% 100.0%
8carA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.77 53.0 3.27e-01 70.1% 16.4%
2zueA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.67 41.0 3.57e-01 70.1% 38.7%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.66 49.0 3.95e-01 79.2% 41.2%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.66 42.0 4.15e-01 70.1% 58.8%
3rf7A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.64 43.0 3.36e-01 79.2% 31.4%
3k59A06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.63 39.0 4.57e-01 71.4% 100.0%
2qr4A01 1.20.140.70 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain 0.63 43.0 3.47e-01 72.7% 44.2%
1vh6A01 6.10.140.1940 Special › Helix non-globular › Helix Hairpins › 0.63 50.0 4.64e-01 85.7% 94.8%
2zxeA02 1.20.1110.10 Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain 0.62 54.0 3.44e-01 100.0% 94.0%
2m6bA00 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.59 40.0 3.27e-01 70.1% 38.7%
2v5cA03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.56 42.0 3.61e-01 83.1% 70.0%
3m7gA02 1.10.8.1010 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.55 42.0 3.98e-01 83.1% 67.4%
3pqaB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.53 44.0 3.10e-01 94.8% 57.4%
1s7bA00 1.10.3730.20 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › 0.52 43.0 3.92e-01 93.5% 80.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4930773 4070.1.1.0 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.80 56.0 4.17e-01 72.7% 31.7%
3231871 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.79 53.0 4.33e-01 70.1% 40.8%
4929191 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.77 53.0 5.43e-01 83.1% 73.3%
3703129 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.73 51.0 3.73e-01 72.7% 40.0%
4993195 632.6.1.15 alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › PF26119 0.73 55.0 5.09e-01 79.2% 74.7%
5039785 632.22.1.200 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF26119 0.72 57.0 5.30e-01 83.1% 72.3%
3232658 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.71 57.0 4.72e-01 85.7% 75.4%
3744787 633.22.1.0 alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) 0.71 55.0 4.59e-01 83.1% 50.8%
3389617 174.1.1.29 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 0.70 56.0 4.67e-01 85.7% 86.2%
4982132 5069.1.3.135 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF5985 0.70 52.0 4.85e-01 77.9% 66.0%
3612568 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 48.0 3.12e-01 72.7% 43.2%
3289622 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.69 54.0 4.64e-01 84.4% 57.5%
3684830 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.68 53.0 4.86e-01 83.1% 93.0%
3409452 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.68 52.0 5.04e-01 80.5% 75.3%
3336154 3562.1.1.11 alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › PGG 0.68 52.0 4.28e-01 79.2% 46.9%
3312188 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.68 48.0 4.64e-01 83.1% 64.4%
3494796 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.68 51.0 3.49e-01 80.5% 70.0%
3242356 605.4.1.19 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › PF30187 0.67 53.0 5.01e-01 83.1% 72.2%
3443603 5069.1.3.70 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Tmemb_14 0.67 52.0 4.66e-01 83.1% 61.9%
3365849 109.4.1.77 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AAR2 0.66 46.0 3.34e-01 72.7% 28.0%
5010044 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.65 49.0 4.60e-01 80.5% 72.6%
3973500 601.1.2.144 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › HBM 0.64 49.0 4.36e-01 83.1% 63.5%
3461850 150.1.1.88 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PHD_Oberon 0.64 48.0 3.80e-01 83.1% 37.6%
5068840 632.25.1.8 alpha bundles › immunoglobulin/albumin-binding domain-like › GBS CAMP factor N-terminal domain › GBS CAMP factor N-terminal domain › NADH_4Fe-4S 0.52 45.0 4.08e-01 98.7% 75.5%
4867290 304.48.1.12 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Mononeg_RNA_pol 0.50 36.0 3.89e-01 84.4% 88.1%