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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00757
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00757
Identity
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-86
Domain cluster:
rep: IMGVR_UViG_3300021488_000008-3300021488-Ga0190305_100017515__D59-140
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrwA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.90 | 84.0 | 7.83e-01 | 100.0% | 81.7% |
| 1z19A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.89 | 80.0 | 7.55e-01 | 100.0% | 82.0% |
| 2kd1A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.87 | 78.0 | 6.98e-01 | 100.0% | 70.3% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.84 | 75.0 | 7.31e-01 | 97.7% | 88.3% |
| 2khvA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.83 | 74.0 | 7.44e-01 | 100.0% | 96.5% |
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.76 | 67.0 | 6.75e-01 | 97.7% | 95.3% |
| 1xo0A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.76 | 67.0 | 6.12e-01 | 95.3% | 73.0% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 43.0 | 5.10e-01 | 70.9% | 96.4% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.66 | 43.0 | 4.16e-01 | 75.6% | 58.0% |
| 4fqnC00 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.65 | 45.0 | 4.57e-01 | 100.0% | 72.9% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.62 | 42.0 | 3.96e-01 | 70.9% | 87.2% |
| 4dmbB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 54.0 | 4.24e-01 | 98.8% | 75.3% |
| 2q14B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 53.0 | 3.97e-01 | 100.0% | 36.9% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.60 | 52.0 | 4.39e-01 | 98.8% | 81.2% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 53.0 | 4.52e-01 | 100.0% | 65.0% |
| 2hekA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.59 | 51.0 | 3.66e-01 | 100.0% | 37.0% |
| 3s63A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.57 | 39.0 | 3.93e-01 | 79.1% | 69.3% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.57 | 43.0 | 3.82e-01 | 80.2% | 77.4% |
| 2hytA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 42.0 | 3.23e-01 | 82.6% | 34.7% |
| 2of7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 42.0 | 3.68e-01 | 81.4% | 64.3% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.56 | 47.0 | 4.31e-01 | 95.3% | 71.6% |
| 4dmvA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 39.0 | 3.96e-01 | 74.4% | 98.8% |
| 2sasA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 49.0 | 3.85e-01 | 100.0% | 59.5% |
| 3beaA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.55 | 45.0 | 3.56e-01 | 90.7% | 45.0% |
| 4akgA14 | 1.20.1280.160 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 38.0 | 3.59e-01 | 74.4% | 100.0% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.53 | 38.0 | 3.75e-01 | 74.4% | 71.4% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 36.0 | 3.40e-01 | 70.9% | 79.4% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 44.0 | 3.87e-01 | 100.0% | 62.7% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 39.0 | 3.32e-01 | 81.4% | 82.4% |
| 7zvsA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 41.0 | 3.34e-01 | 90.7% | 47.5% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 37.0 | 2.64e-01 | 89.5% | 23.3% |
| 7ylvH01 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.50 | 33.0 | 3.59e-01 | 77.9% | 82.6% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4009383 | 186.1.1.3 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 | 0.92 | 87.0 | 7.76e-01 | 100.0% | 83.5% |
| 3964236 | 186.1.1.8 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M | 0.91 | 81.0 | 7.16e-01 | 100.0% | 68.3% |
| 3978656 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.90 | 86.0 | 7.63e-01 | 100.0% | 83.5% |
| 4004484 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.89 | 85.0 | 7.54e-01 | 100.0% | 83.5% |
| 4090274 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 84.0 | 7.73e-01 | 98.8% | 82.9% |
| 4172485 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.89 | 80.0 | 7.33e-01 | 100.0% | 75.5% |
| 4959184 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.89 | 79.0 | 7.62e-01 | 98.8% | 85.3% |
| 4663744 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.88 | 77.0 | 7.03e-01 | 100.0% | 72.7% |
| 4655797 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 80.0 | 7.76e-01 | 97.7% | 87.4% |
| 5052501 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 82.0 | 7.76e-01 | 100.0% | 85.0% |
| 2010353 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 78.0 | 7.01e-01 | 100.0% | 70.7% |
| 4947439 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.87 | 78.0 | 7.69e-01 | 97.7% | 90.0% |
| 4964250 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.87 | 80.0 | 7.15e-01 | 100.0% | 73.0% |
| 5076856 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.87 | 83.0 | 7.63e-01 | 100.0% | 87.6% |
| 170034 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.87 | 78.0 | 7.16e-01 | 100.0% | 75.5% |
| 4007795 | 186.1.1.8 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M | 0.87 | 78.0 | 6.96e-01 | 100.0% | 71.3% |
| 3965042 | 186.1.1.8 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M | 0.87 | 78.0 | 6.96e-01 | 100.0% | 71.3% |
| 3589750 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.86 | 75.0 | 6.98e-01 | 100.0% | 76.2% |
| 5054950 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.86 | 81.0 | 7.02e-01 | 100.0% | 70.4% |
| 4004726 | 186.1.1.8 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M | 0.85 | 74.0 | 6.70e-01 | 100.0% | 70.4% |
| 4545574 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.85 | 78.0 | 7.39e-01 | 100.0% | 85.0% |
| 3982872 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.84 | 63.0 | 6.94e-01 | 80.2% | 97.1% |
| 3587238 | 186.1.1.3 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 | 0.84 | 75.0 | 6.98e-01 | 100.0% | 79.0% |
| 299159 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.84 | 75.0 | 7.05e-01 | 97.7% | 80.6% |
| 4928147 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.83 | 77.0 | 7.16e-01 | 98.8% | 85.7% |
| 4406523 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.83 | 76.0 | 6.97e-01 | 100.0% | 77.3% |
| 4999494 | 186.1.1.3 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 | 0.81 | 73.0 | 6.25e-01 | 96.5% | 73.8% |
| 5011489 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.81 | 68.0 | 6.63e-01 | 100.0% | 82.1% |
| 4999471 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.79 | 72.0 | 6.38e-01 | 98.8% | 71.7% |
| 5055663 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.76 | 67.0 | 5.86e-01 | 100.0% | 64.6% |
| 3789663 | 4979.2.1.0 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) | 0.68 | 43.0 | 4.61e-01 | 97.7% | 77.1% |
| 3458503 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.67 | 52.0 | 4.85e-01 | 100.0% | 66.4% |
| 3519127 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.65 | 42.0 | 4.35e-01 | 100.0% | 71.2% |
| 3938558 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.64 | 42.0 | 4.20e-01 | 100.0% | 64.4% |
| 3839095 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.62 | 54.0 | 4.39e-01 | 100.0% | 85.1% |
| 4955962 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.61 | 52.0 | 4.33e-01 | 100.0% | 84.0% |
| 3993765 | 627.1.1.0 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain | 0.61 | 49.0 | 4.96e-01 | 86.0% | 98.8% |
| 3477131 | 101.1.1.227 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_NOL4_2nd | 0.60 | 43.0 | 4.65e-01 | 80.2% | 92.9% |
| 3420431 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.60 | 40.0 | 4.09e-01 | 94.2% | 69.4% |
| 3608662 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 36.0 | 3.65e-01 | 75.6% | 62.4% |
| 3600638 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.58 | 40.0 | 4.54e-01 | 87.2% | 95.3% |
| 3217348 | 103.5.1.1 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › PYC_OADA | 0.57 | 43.0 | 3.79e-01 | 97.7% | 54.6% |
| 3972395 | 101.1.2.847 ↗ | alpha arrays › HTH › HTH › winged helix domain › GDH_ACT1 | 0.56 | 42.0 | 3.33e-01 | 81.4% | 81.6% |
| 3683980 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.55 | 44.0 | 3.36e-01 | 89.5% | 44.1% |
| 4013695 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.54 | 41.0 | 3.76e-01 | 97.7% | 61.7% |
| 5072101 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.54 | 39.0 | 3.61e-01 | 77.9% | 60.9% |
| 3182665 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.53 | 44.0 | 4.29e-01 | 98.8% | 81.1% |
| 4014838 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.53 | 44.0 | 2.79e-01 | 94.2% | 56.2% |
| 3233936 | 627.1.1.2 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › DUF5601 | 0.52 | 45.0 | 4.43e-01 | 96.5% | 89.5% |
| 3490481 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.51 | 45.0 | 4.25e-01 | 97.7% | 93.3% |
| 3923569 | 3223.1.1.1 ↗ | beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC | 0.50 | 39.0 | 2.59e-01 | 87.2% | 57.3% |
D2
medium
residues 115-157_232-321
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.83 | 58.0 | 5.23e-01 | 71.4% | 94.2% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.82 | 60.0 | 5.04e-01 | 75.2% | 92.4% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.82 | 59.0 | 4.90e-01 | 74.4% | 87.8% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.79 | 58.0 | 5.05e-01 | 75.2% | 91.8% |
| 1ae9A00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.73 | 62.0 | 5.65e-01 | 88.7% | 100.0% |
| 4a8eA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.73 | 70.0 | 6.22e-01 | 100.0% | 96.6% |
| 1aihA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.70 | 61.0 | 5.57e-01 | 91.7% | 93.5% |
| 3uxuA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.68 | 64.0 | 5.98e-01 | 99.2% | 100.0% |
| 2ckzC01 | 1.20.1250.40 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit | 0.53 | 27.0 | 2.96e-01 | 72.2% | 57.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016957 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 62.0 | 5.59e-01 | 73.7% | 97.1% |
| 4966027 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 63.0 | 5.53e-01 | 75.2% | 85.3% |
| 5059725 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.85 | 63.0 | 5.54e-01 | 75.2% | 86.1% |
| 3946063 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 79.0 | 6.81e-01 | 100.0% | 99.5% |
| 5000880 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 60.0 | 5.30e-01 | 75.2% | 85.6% |
| 4007467 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 74.0 | 6.15e-01 | 100.0% | 92.3% |
| 4954527 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 74.0 | 6.08e-01 | 100.0% | 94.1% |
| 4997941 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 72.0 | 6.03e-01 | 97.7% | 96.2% |
| 5073434 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.76 | 72.0 | 6.16e-01 | 99.2% | 99.5% |
| 5008693 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.75 | 68.0 | 5.79e-01 | 98.5% | 97.6% |
| 4954640 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.73 | 68.0 | 5.85e-01 | 98.5% | 100.0% |
| 150341 | 101.1.8.8 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 | 0.72 | 68.0 | 6.32e-01 | 100.0% | 100.0% |
| 4021119 | 101.1.8.7 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › NDC10_II | 0.71 | 66.0 | 4.84e-01 | 100.0% | 89.3% |
| 4181053 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.71 | 62.0 | 5.32e-01 | 91.7% | 96.0% |
| 5041911 | 101.1.8.8 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 | 0.71 | 67.0 | 6.20e-01 | 100.0% | 99.4% |
| 5076857 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.69 | 61.0 | 5.51e-01 | 92.5% | 99.4% |
| 4380833 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.69 | 60.0 | 5.50e-01 | 91.0% | 98.2% |
| 5061203 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.67 | 60.0 | 5.18e-01 | 92.5% | 96.8% |
| 5002702 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.66 | 58.0 | 5.04e-01 | 91.7% | 95.8% |
| 3964657 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.66 | 62.0 | 5.35e-01 | 99.2% | 95.9% |
| 4031733 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 26.0 | 2.79e-01 | 74.4% | 50.4% |
| 3234993 | 210.1.2.6 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Phospholip_B | 0.51 | 40.0 | 2.73e-01 | 85.7% | 90.3% |
D3
medium
residues 158-231
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xjvA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 40.0 | 3.20e-01 | 75.7% | 97.3% |
| 5r0dB01 | 2.60.34.20 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › | 0.54 | 41.0 | 3.33e-01 | 81.1% | 67.1% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 35.0 | 3.63e-01 | 79.7% | 74.2% |
| 1p6vA00 | 2.40.280.10 | Mainly Beta › Beta Barrel › Small Protein B; Chain: A; › Small protein B | 0.53 | 43.0 | 3.68e-01 | 90.5% | 60.8% |
| 8dc1A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 39.0 | 2.74e-01 | 81.1% | 70.0% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 40.0 | 3.31e-01 | 87.8% | 57.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 33.0 | 3.57e-01 | 97.3% | 84.2% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 36.0 | 2.50e-01 | 78.4% | 82.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979786 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 59.0 | 4.98e-01 | 90.5% | 48.3% |
| 3587110 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.70 | 61.0 | 4.83e-01 | 95.9% | 54.7% |
| 4659012 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.68 | 58.0 | 4.66e-01 | 94.6% | 58.6% |
| 4274013 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.67 | 60.0 | 4.77e-01 | 100.0% | 61.3% |
| 4134015 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.67 | 57.0 | 4.49e-01 | 94.6% | 63.2% |
| 3589779 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.66 | 59.0 | 4.71e-01 | 100.0% | 60.7% |
| 3604284 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 38.0 | 3.61e-01 | 87.8% | 55.8% |
| 4014625 | 220.1.1.113 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_11 | 0.55 | 42.0 | 3.44e-01 | 82.4% | 52.1% |
| 3739773 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 39.0 | 3.73e-01 | 81.1% | 74.7% |
| 4002771 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 38.0 | 3.21e-01 | 79.7% | 45.9% |
| 5013892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 30.0 | 3.34e-01 | 78.4% | 74.5% |