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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00911
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00911
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-93
Domain cluster:
rep: ON529852.1__USN14389.1__KABACHOK_05760__00552__D6-95
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f68X01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.73 | 40.0 | 3.41e-01 | 76.7% | 34.8% |
| 2bueA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 50.0 | 3.98e-01 | 95.6% | 68.2% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.57 | 50.0 | 4.74e-01 | 100.0% | 82.2% |
| 6vddD01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.57 | 45.0 | 3.55e-01 | 84.4% | 75.3% |
| 4xpkA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 49.0 | 4.21e-01 | 94.4% | 70.2% |
| 1n62C02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.57 | 50.0 | 4.77e-01 | 98.9% | 84.8% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.56 | 42.0 | 2.48e-01 | 77.8% | 17.4% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.56 | 35.0 | 3.35e-01 | 82.2% | 52.4% |
| 7sf2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.72e-01 | 83.3% | 66.7% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 29.0 | 3.01e-01 | 95.6% | 50.0% |
| 2wpwC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 48.0 | 3.32e-01 | 98.9% | 34.8% |
| 4d8pB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.55 | 48.0 | 4.62e-01 | 100.0% | 87.3% |
| 3ey5A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 45.0 | 3.80e-01 | 91.1% | 63.9% |
| 2fsrA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 48.0 | 3.90e-01 | 98.9% | 64.9% |
| 2iv2X01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.53 | 32.0 | 3.78e-01 | 72.2% | 98.2% |
| 6wqbA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 45.0 | 3.93e-01 | 95.6% | 68.6% |
| 2k5tA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 45.0 | 4.00e-01 | 94.4% | 68.8% |
| 3frmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 43.0 | 3.16e-01 | 91.1% | 38.9% |
| 6a97C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 47.0 | 4.17e-01 | 100.0% | 84.0% |
| 1s3zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 45.0 | 3.89e-01 | 97.8% | 72.8% |
| 2fa1A00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 35.0 | 2.89e-01 | 100.0% | 39.6% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 43.0 | 3.98e-01 | 93.3% | 91.7% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 27.0 | 3.04e-01 | 91.1% | 62.7% |
| 1yx0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 44.0 | 3.69e-01 | 94.4% | 67.5% |
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 41.0 | 3.47e-01 | 90.0% | 97.5% |
| 3mgdB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 42.0 | 3.62e-01 | 94.4% | 75.0% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 39.0 | 3.83e-01 | 84.4% | 98.0% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 43.0 | 3.52e-01 | 94.4% | 68.9% |
| 4jmdA00 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.50 | 44.0 | 3.25e-01 | 100.0% | 72.0% |
| 8a9nA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 3.77e-01 | 94.4% | 81.7% |
| 3jvnA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 43.0 | 3.96e-01 | 97.8% | 88.5% |
| 2fiwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 44.0 | 3.66e-01 | 97.8% | 66.9% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3917386 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.70 | 53.0 | 4.25e-01 | 100.0% | 41.1% |
| 4001680 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 36.0 | 3.68e-01 | 81.1% | 59.1% |
| 4975018 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 46.0 | 3.60e-01 | 82.2% | 75.9% |
| 4956223 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 48.0 | 3.41e-01 | 88.9% | 81.7% |
| 5040509 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 48.0 | 3.27e-01 | 88.9% | 84.6% |
| 3880284 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.58 | 51.0 | 3.95e-01 | 100.0% | 81.0% |
| None | — | 0.58 | 43.0 | 2.58e-01 | 81.1% | 15.9% | |
| 5042489 | 244.3.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C | 0.57 | 47.0 | 4.65e-01 | 98.9% | 85.1% |
| 4944011 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.57 | 42.0 | 4.27e-01 | 98.9% | 80.0% |
| 3905773 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.57 | 51.0 | 4.08e-01 | 100.0% | 56.7% |
| 5078098 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 47.0 | 4.00e-01 | 94.4% | 67.1% |
| 5059335 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.56 | 50.0 | 4.68e-01 | 100.0% | 81.8% |
| 5010539 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.55 | 40.0 | 2.99e-01 | 77.8% | 72.5% |
| 5049480 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 48.0 | 4.09e-01 | 97.8% | 66.2% |
| 4971732 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.54 | 33.0 | 3.91e-01 | 71.1% | 100.0% |
| 5045144 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.53 | 45.0 | 3.86e-01 | 94.4% | 62.0% |
| 3433185 | 1094.1.1.0 ↗ | a/b three-layered sandwiches › Polycomb protein Eed insertion domain › Polycomb protein Eed insertion domain › Polycomb protein Eed insertion domain | 0.53 | 40.0 | 3.03e-01 | 78.9% | 49.3% |
| 4153551 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 43.0 | 3.92e-01 | 90.0% | 75.8% |
| 3733755 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 44.0 | 3.27e-01 | 94.4% | 50.8% |
| 5060697 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 42.0 | 3.79e-01 | 91.1% | 73.1% |
| 3278719 | 881.1.1.15 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 | 0.52 | 44.0 | 3.83e-01 | 94.4% | 87.9% |
| 3596991 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.52 | 35.0 | 3.20e-01 | 72.2% | 51.6% |
| 5076507 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 45.0 | 3.82e-01 | 97.8% | 68.2% |
| 3950901 | 2484.1.1.73 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Rv2179c-like | 0.51 | 41.0 | 3.42e-01 | 90.0% | 94.1% |
| 3589960 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 43.0 | 3.60e-01 | 94.4% | 69.4% |
| 5013278 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 42.0 | 3.29e-01 | 91.1% | 46.0% |
| None | — | 0.51 | 35.0 | 3.98e-01 | 75.6% | 97.0% | |
| 1841016 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.51 | 31.0 | 2.35e-01 | 75.6% | 23.4% |
| 3943660 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.51 | 44.0 | 3.75e-01 | 97.8% | 69.9% |
| 4942586 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.51 | 44.0 | 4.12e-01 | 95.6% | 84.5% |
| 5078029 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.51 | 36.0 | 3.40e-01 | 76.7% | 94.8% |
| 5049225 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 44.0 | 3.63e-01 | 97.8% | 65.5% |
| 5071209 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 43.0 | 3.81e-01 | 94.4% | 73.8% |
| 5046627 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.50 | 42.0 | 3.81e-01 | 94.4% | 80.8% |
| 4996349 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 42.0 | 3.58e-01 | 94.4% | 71.2% |
| 3587257 | 213.1.1.21 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C | 0.50 | 42.0 | 3.28e-01 | 94.4% | 49.3% |
| 3951613 | 2484.1.1.73 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Rv2179c-like | 0.50 | 37.0 | 3.13e-01 | 80.0% | 95.2% |
D2
high
residues 99-151
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3w42A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.64 | 53.0 | 3.71e-01 | 100.0% | 81.9% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.63 | 49.0 | 4.23e-01 | 90.6% | 96.7% |
| 6scxC01 | 3.90.79.20 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › | 0.62 | 48.0 | 3.48e-01 | 92.5% | 52.3% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 46.0 | 3.40e-01 | 92.5% | 94.0% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 3.73e-01 | 100.0% | 78.4% |
| 2ckaA01 | 3.40.5.120 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.59 | 43.0 | 4.43e-01 | 83.0% | 93.9% |
| 5wjpA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 40.0 | 3.42e-01 | 75.5% | 95.8% |
| 1ifrA00 | 2.60.40.1260 | Mainly Beta › Sandwich › Immunoglobulin-like › Lamin Tail domain | 0.58 | 42.0 | 3.38e-01 | 79.2% | 67.3% |
| 6i6rB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 3.71e-01 | 88.7% | 56.6% |
| 2mngA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 40.0 | 3.05e-01 | 75.5% | 44.3% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.57 | 41.0 | 3.20e-01 | 79.2% | 58.2% |
| 1vziA01 | 2.20.28.100 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Desulphoferrodoxin, N-terminal domain | 0.56 | 38.0 | 4.08e-01 | 90.6% | 100.0% |
| 5of3A00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.56 | 44.0 | 2.88e-01 | 100.0% | 54.2% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 39.0 | 3.54e-01 | 96.2% | 51.9% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.56 | 40.0 | 3.11e-01 | 79.2% | 54.2% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.56 | 40.0 | 3.26e-01 | 79.2% | 89.9% |
| 3l5hA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.34e-01 | 75.5% | 47.4% |
| 1nbwA02 | 3.90.470.30 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Coenzyme B12-Dependent Enzyme linker domain | 0.55 | 42.0 | 3.28e-01 | 92.5% | 47.6% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.55 | 45.0 | 4.22e-01 | 100.0% | 94.4% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 37.0 | 2.75e-01 | 73.6% | 98.7% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.95e-01 | 81.1% | 98.2% |
| 4d05A01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.54 | 42.0 | 3.83e-01 | 90.6% | 75.0% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.54 | 41.0 | 3.23e-01 | 86.8% | 56.9% |
| 1o7dD01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.54 | 43.0 | 2.83e-01 | 94.3% | 45.6% |
| 3gldA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.54 | 41.0 | 3.15e-01 | 86.8% | 91.9% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 37.0 | 2.99e-01 | 79.2% | 61.8% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 42.0 | 3.06e-01 | 90.6% | 91.1% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.52 | 35.0 | 3.09e-01 | 71.7% | 83.3% |
| 1w4tA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.51 | 39.0 | 2.82e-01 | 86.8% | 37.6% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 37.0 | 3.01e-01 | 77.4% | 51.0% |
| 3bvxA04 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.51 | 42.0 | 2.71e-01 | 98.1% | 42.1% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.51 | 39.0 | 3.60e-01 | 90.6% | 73.7% |
| 2p17A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 42.0 | 2.82e-01 | 98.1% | 82.3% |
| 2w9xB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 3.05e-01 | 77.4% | 64.0% |
| 3tm8B00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 36.0 | 2.36e-01 | 81.1% | 47.6% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.35e-01 | 90.6% | 62.9% |
| 4gr5C01 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.50 | 37.0 | 3.60e-01 | 96.2% | 70.3% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 39.0 | 2.53e-01 | 100.0% | 77.5% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995671 | 3115.1.1.12 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 | 0.68 | 48.0 | 4.90e-01 | 73.6% | 80.0% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.67 | 46.0 | 4.92e-01 | 73.6% | 86.7% |
| 3705856 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.66 | 54.0 | 3.41e-01 | 94.3% | 59.0% |
| 5048876 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.65 | 46.0 | 4.41e-01 | 77.4% | 93.8% |
| 3505268 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.64 | 44.0 | 3.37e-01 | 73.6% | 64.4% |
| 5001166 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.64 | 44.0 | 3.37e-01 | 73.6% | 31.1% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.61 | 42.0 | 4.38e-01 | 73.6% | 95.6% |
| 4268493 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.61 | 41.0 | 4.27e-01 | 86.8% | 82.2% |
| 5075622 | 12.3.1.18 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydr_116N | 0.61 | 51.0 | 3.17e-01 | 96.2% | 59.1% |
| 3991455 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.60 | 45.0 | 4.47e-01 | 83.0% | 81.8% |
| 3637520 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.59 | 39.0 | 3.17e-01 | 73.6% | 34.3% |
| 3388590 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.59 | 43.0 | 4.20e-01 | 96.2% | 73.3% |
| 3404558 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.58 | 43.0 | 4.46e-01 | 98.1% | 88.0% |
| 3533173 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.57 | 44.0 | 4.05e-01 | 94.3% | 95.0% |
| 3944717 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 49.0 | 3.19e-01 | 98.1% | 92.8% |
| 1568132 | 10.32.1.52 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GH115_C | 0.57 | 41.0 | 3.08e-01 | 77.4% | 97.1% |
| 3400697 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.57 | 41.0 | 4.10e-01 | 94.3% | 77.8% |
| 1032560 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.56 | 40.0 | 3.60e-01 | 81.1% | 54.2% |
| 3265148 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.56 | 44.0 | 3.66e-01 | 88.7% | 80.0% |
| 3180836 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.56 | 45.0 | 2.78e-01 | 94.3% | 97.2% |
| 3576112 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.56 | 47.0 | 3.13e-01 | 98.1% | 55.2% |
| 169110 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 45.0 | 4.24e-01 | 100.0% | 95.7% |
| 4461643 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.55 | 39.0 | 3.86e-01 | 94.3% | 71.7% |
| 3415618 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.54 | 39.0 | 3.86e-01 | 96.2% | 71.7% |
| 4089566 | 3857.1.1.1 ↗ | beta sandwiches › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head_binding | 0.54 | 40.0 | 3.44e-01 | 84.9% | 56.8% |
| 3520955 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.54 | 45.0 | 2.92e-01 | 98.1% | 57.0% |
| 3394204 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.54 | 40.0 | 4.02e-01 | 94.3% | 83.3% |
| 3244906 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.54 | 40.0 | 3.46e-01 | 94.3% | 90.0% |
| 4132202 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 38.0 | 3.04e-01 | 75.5% | 49.1% |
| 3516159 | 109.4.1.88 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MUN | 0.53 | 38.0 | 2.19e-01 | 83.0% | 12.2% |
| 3630069 | 223.1.1.101 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30734 | 0.53 | 41.0 | 2.35e-01 | 86.8% | 16.4% |
| 3592728 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 3.57e-01 | 94.3% | 58.0% |
| 1937230 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.52 | 42.0 | 3.04e-01 | 90.6% | 89.4% |
| 3807153 | 221.1.1.88 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CLU_N | 0.52 | 40.0 | 3.44e-01 | 92.5% | 75.0% |
| 3600564 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 37.0 | 3.42e-01 | 77.4% | 58.6% |
| 3481359 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.30e-01 | 88.7% | 71.0% |
| 3226828 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.51 | 38.0 | 3.06e-01 | 90.6% | 36.8% |
| 4627522 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.51 | 38.0 | 2.64e-01 | 86.8% | 59.6% |
| 3617423 | 1.1.2.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N | 0.51 | 40.0 | 3.40e-01 | 88.7% | 62.1% |
| 3672250 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.51 | 41.0 | 2.88e-01 | 92.5% | 71.6% |
| 4127812 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.51 | 38.0 | 3.03e-01 | 84.9% | 64.2% |
| 3173409 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.51 | 40.0 | 3.36e-01 | 92.5% | 88.5% |
| 3386935 | 2484.1.1.53 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB_Mbl | 0.51 | 40.0 | 3.13e-01 | 100.0% | 48.0% |
| 2324091 | 11.1.1.158 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GldM_4th | 0.51 | 39.0 | 3.22e-01 | 88.7% | 72.0% |
| 3764626 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.51 | 35.0 | 2.79e-01 | 79.2% | 33.0% |
| 4018289 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 39.0 | 3.09e-01 | 98.1% | 93.8% |
| 3968655 | 10.12.1.27 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 | 0.51 | 37.0 | 2.97e-01 | 77.4% | 47.7% |
| 3761259 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.51 | 41.0 | 2.79e-01 | 98.1% | 44.9% |
| 3649276 | 887.1.1.0 ↗ | a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e | 0.50 | 40.0 | 3.23e-01 | 96.2% | 99.2% |
| 5072765 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.50 | 40.0 | 2.67e-01 | 92.5% | 77.7% |
| 3514644 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.50 | 39.0 | 3.35e-01 | 88.7% | 58.9% |
| 3764569 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.50 | 36.0 | 2.86e-01 | 79.2% | 38.3% |
| 3555970 | 12.5.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 | 0.50 | 35.0 | 2.58e-01 | 77.4% | 75.3% |