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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00926
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00926
Identity
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-82
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.66 | 38.0 | 3.81e-01 | 83.5% | 55.7% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.63 | 47.0 | 4.18e-01 | 78.5% | 90.0% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 33.0 | 3.94e-01 | 79.7% | 76.9% |
| 2kp7A01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.60 | 44.0 | 4.56e-01 | 79.7% | 97.3% |
| 2ozbB01 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 41.0 | 3.52e-01 | 72.2% | 79.4% |
| 3nb0B03 | 6.10.260.10 | Special › Helix non-globular › F1FO ATP Synthase › | 0.59 | 34.0 | 3.33e-01 | 79.7% | 52.4% |
| 4rflA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.59 | 50.0 | 3.87e-01 | 100.0% | 93.0% |
| 3no4A00 | 3.40.50.10310 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Creatininase | 0.58 | 53.0 | 3.63e-01 | 100.0% | 83.3% |
| 6ne6A01 | 1.10.400.10 | Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like | 0.57 | 47.0 | 4.29e-01 | 96.2% | 73.7% |
| 3fi9A02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.57 | 44.0 | 3.37e-01 | 82.3% | 80.3% |
| 4l6rA02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 45.0 | 3.08e-01 | 86.1% | 83.6% |
| 2gf4A00 | 1.20.1270.110 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 | 0.57 | 43.0 | 4.17e-01 | 96.2% | 72.7% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 42.0 | 4.01e-01 | 78.5% | 76.9% |
| 2h21A02 | 3.90.1420.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain | 0.56 | 41.0 | 3.28e-01 | 97.5% | 37.0% |
| 1oahA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 47.0 | 3.91e-01 | 93.7% | 71.8% |
| 2p3yA02 | 1.10.3360.10 | Mainly Alpha › Orthogonal Bundle › VPA0735-like fold › VPA0735-like domain | 0.55 | 45.0 | 4.06e-01 | 93.7% | 64.5% |
| 2q9rA01 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.54 | 46.0 | 3.57e-01 | 100.0% | 70.3% |
| 3bc8A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 48.0 | 3.97e-01 | 98.7% | 86.2% |
| 7kdfB01 | 1.10.418.60 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Nuf2 subunit | 0.53 | 46.0 | 3.80e-01 | 97.5% | 78.8% |
| 4ab5B01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 41.0 | 3.73e-01 | 87.3% | 84.3% |
| 1o3uA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 46.0 | 4.02e-01 | 96.2% | 94.2% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.52 | 33.0 | 3.88e-01 | 77.2% | 92.7% |
| 7ahdC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.01e-01 | 89.9% | 45.2% |
| 1zq9A02 | 1.10.8.480 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 38.0 | 3.65e-01 | 83.5% | 100.0% |
| 4hhyC01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.51 | 41.0 | 3.46e-01 | 94.9% | 51.9% |
| 2bk9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 3.48e-01 | 92.4% | 77.1% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.51 | 40.0 | 3.48e-01 | 84.8% | 98.4% |
| 2pgsA03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.51 | 40.0 | 3.78e-01 | 87.3% | 100.0% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.51 | 43.0 | 3.72e-01 | 93.7% | 77.6% |
| 3smtA02 | 3.90.1420.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain | 0.50 | 42.0 | 3.31e-01 | 97.5% | 43.9% |
| 3mcqA02 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.50 | 40.0 | 3.27e-01 | 92.4% | 62.5% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4672000 | 589.1.1.0 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain | 0.67 | 46.0 | 3.53e-01 | 97.5% | 32.0% |
| 3489504 | 135.1.1.0 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain | 0.67 | 55.0 | 4.74e-01 | 89.9% | 80.0% |
| 4929631 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 57.0 | 4.44e-01 | 97.5% | 51.7% |
| 4028177 | 102.1.3.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain | 0.65 | 49.0 | 3.62e-01 | 81.0% | 91.9% |
| 3788536 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.64 | 52.0 | 3.23e-01 | 88.6% | 15.6% |
| 3460838 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.63 | 54.0 | 3.66e-01 | 97.5% | 31.1% |
| 3239379 | 102.1.3.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › DZF_C | 0.62 | 45.0 | 3.97e-01 | 77.2% | 85.2% |
| 3870915 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 43.0 | 3.15e-01 | 72.2% | 33.0% |
| 3411996 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.61 | 43.0 | 3.48e-01 | 73.4% | 55.2% |
| 3489734 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.60 | 46.0 | 4.61e-01 | 83.5% | 96.2% |
| 3249566 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.60 | 49.0 | 4.29e-01 | 89.9% | 75.0% |
| 3732287 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.59 | 45.0 | 3.99e-01 | 83.5% | 85.8% |
| 4970947 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.58 | 49.0 | 4.06e-01 | 96.2% | 51.0% |
| 1790171 | 1050.1.1.1 ↗ | alpha arrays › BID domain of Bartonella effector protein (Bep) › BID domain of Bartonella effector protein (Bep) › BID domain of Bartonella effector protein (Bep) › Bep_C_terminal | 0.58 | 40.0 | 3.63e-01 | 70.9% | 86.0% |
| 3251018 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.56 | 47.0 | 4.15e-01 | 94.9% | 65.0% |
| 3924318 | 6166.1.1.0 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 | 0.56 | 42.0 | 3.14e-01 | 79.7% | 73.3% |
| 5061242 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 40.0 | 2.79e-01 | 78.5% | 75.9% |
| 5083380 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 46.0 | 3.15e-01 | 91.1% | 74.5% |
| 3743584 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.55 | 46.0 | 4.15e-01 | 96.2% | 67.8% |
| 3212250 | 135.1.1.0 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain | 0.54 | 46.0 | 4.20e-01 | 96.2% | 70.0% |
| 1155488 | 632.2.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GA | 0.54 | 35.0 | 3.93e-01 | 87.3% | 83.9% |
| 3600118 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.54 | 45.0 | 4.29e-01 | 91.1% | 82.1% |
| 3412191 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.54 | 40.0 | 3.94e-01 | 81.0% | 83.5% |
| 5064406 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.54 | 41.0 | 3.64e-01 | 84.8% | 72.5% |
| 5010956 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.54 | 42.0 | 3.97e-01 | 84.8% | 82.1% |
| 3282529 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.53 | 45.0 | 4.09e-01 | 91.1% | 81.9% |
| 3517280 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.53 | 45.0 | 2.97e-01 | 97.5% | 22.5% |
| 3927684 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.53 | 44.0 | 3.49e-01 | 88.6% | 83.2% |
| 5039732 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 37.0 | 3.27e-01 | 72.2% | 70.8% |
| 3538350 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.52 | 41.0 | 3.42e-01 | 83.5% | 57.0% |
| 3258130 | 101.1.2.119 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tau95 | 0.52 | 37.0 | 2.95e-01 | 74.7% | 94.5% |
| 4095847 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.51 | 42.0 | 3.01e-01 | 89.9% | 31.5% |
| 3931393 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.51 | 41.0 | 3.47e-01 | 86.1% | 58.4% |
| 4597634 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.50 | 41.0 | 4.09e-01 | 86.1% | 96.2% |
| 4975320 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.50 | 43.0 | 3.15e-01 | 94.9% | 35.9% |
| 3601385 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.50 | 42.0 | 3.35e-01 | 93.7% | 80.6% |
D2
high
residues 251-400
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.60 | 30.0 | 3.27e-01 | 92.7% | 54.4% |
| 2pv4A00 | 1.10.3440.10 | Mainly Alpha › Orthogonal Bundle › Sama2622-like fold › Sama2622-like | 0.59 | 31.0 | 3.25e-01 | 83.3% | 53.1% |
| 3oqvA00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.54 | 38.0 | 3.43e-01 | 100.0% | 50.2% |
| 2igpA00 | 1.10.418.30 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Ncd80 subunit | 0.54 | 39.0 | 4.34e-01 | 93.3% | 100.0% |
| 6vvoE02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.52 | 30.0 | 3.51e-01 | 91.3% | 82.8% |
| 8jpdG01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.51 | 37.0 | 3.82e-01 | 82.7% | 77.9% |
| 4q5qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 29.0 | 3.47e-01 | 76.0% | 81.9% |
D3
high
residues 420-502_535-564
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.72 | 50.0 | 5.15e-01 | 76.1% | 74.3% |
| 4xpwA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.69 | 40.0 | 3.86e-01 | 79.6% | 49.6% |
| 4dlqA02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 39.0 | 4.27e-01 | 82.3% | 68.4% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.65 | 44.0 | 4.48e-01 | 84.1% | 70.9% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 43.0 | 4.56e-01 | 80.5% | 78.6% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.64 | 50.0 | 4.45e-01 | 85.8% | 57.9% |
| 7tj9A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.63 | 39.0 | 4.03e-01 | 80.5% | 65.1% |
| 1sj7C00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.60 | 45.0 | 3.91e-01 | 77.0% | 85.5% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 46.0 | 4.15e-01 | 81.4% | 79.1% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 53.0 | 4.66e-01 | 98.2% | 75.0% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 40.0 | 3.89e-01 | 86.7% | 60.9% |
| 2fsfB04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.57 | 50.0 | 4.11e-01 | 98.2% | 71.7% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 37.0 | 3.73e-01 | 84.1% | 65.2% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 44.0 | 4.19e-01 | 83.2% | 71.4% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 41.0 | 3.83e-01 | 99.1% | 64.5% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 41.0 | 3.75e-01 | 100.0% | 60.5% |
| 3agrA01 | 3.30.420.530 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 39.0 | 3.10e-01 | 78.8% | 64.8% |
| 1u61A00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.51 | 39.0 | 3.79e-01 | 86.7% | 71.7% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3427778 | 604.1.1.144 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26575 | 0.75 | 46.0 | 5.36e-01 | 84.1% | 86.3% |
| 3252760 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.74 | 52.0 | 5.19e-01 | 80.5% | 71.1% |
| 5019542 | 622.4.1.67 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › DUF5518 | 0.73 | 47.0 | 5.01e-01 | 77.0% | 74.7% |
| 4474640 | 604.1.1.150 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 | 0.73 | 56.0 | 5.41e-01 | 80.5% | 77.6% |
| 4986745 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 46.0 | 4.03e-01 | 87.6% | 45.0% |
| 5058842 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.68 | 43.0 | 4.80e-01 | 82.3% | 80.0% |
| 5044572 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.68 | 47.0 | 4.92e-01 | 77.0% | 76.2% |
| 3931480 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 39.0 | 4.37e-01 | 82.3% | 71.1% |
| 3231223 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.67 | 56.0 | 4.83e-01 | 91.2% | 67.2% |
| 5007869 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.67 | 39.0 | 4.18e-01 | 77.0% | 66.0% |
| 3404501 | 706.1.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › MIEAP | 0.66 | 54.0 | 4.49e-01 | 87.6% | 76.9% |
| 4520789 | 1204.1.1.0 ↗ | alpha bundles › Bacteriocin pyocin-S2 N-terminal domain › Bacteriocin pyocin-S2 N-terminal domain › Bacteriocin pyocin-S2 N-terminal domain | 0.65 | 53.0 | 4.33e-01 | 87.6% | 55.2% |
| 4018180 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.64 | 58.0 | 4.42e-01 | 98.2% | 52.2% |
| 3616669 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 49.0 | 4.94e-01 | 84.1% | 79.1% |
| 3332592 | 5069.1.1.62 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Chloroplast_duf | 0.64 | 40.0 | 4.09e-01 | 82.3% | 64.5% |
| 3472115 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.64 | 48.0 | 4.69e-01 | 79.6% | 78.4% |
| 3238347 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.63 | 53.0 | 4.15e-01 | 94.7% | 64.7% |
| 3582242 | 1075.5.1.5 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Rft-1 | 0.61 | 48.0 | 3.60e-01 | 84.1% | 67.9% |
| 3238213 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 47.0 | 4.75e-01 | 82.3% | 82.7% |
| 4169938 | 3684.1.1.44 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DAHL | 0.60 | 38.0 | 3.83e-01 | 81.4% | 61.7% |
| 3459347 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.60 | 46.0 | 3.90e-01 | 79.6% | 80.6% |
| 3248743 | 3277.2.1.1 ↗ | alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C | 0.60 | 39.0 | 4.27e-01 | 77.0% | 78.9% |
| None | — | 0.60 | 47.0 | 3.97e-01 | 85.0% | 68.7% | |
| 3979628 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.59 | 46.0 | 4.12e-01 | 82.3% | 60.6% |
| 3673192 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.58 | 43.0 | 3.76e-01 | 80.5% | 51.8% |
| 4963154 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.57 | 47.0 | 3.22e-01 | 90.3% | 42.2% |
| 3511084 | 3922.1.1.225 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF842 | 0.54 | 43.0 | 4.21e-01 | 85.0% | 92.0% |
| 3406162 | 4006.1.1.13 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › DUF842 | 0.53 | 43.0 | 4.19e-01 | 85.8% | 81.6% |
| 4026971 | 4323.1.1.2 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.52 | 48.0 | 4.35e-01 | 100.0% | 86.0% |
| 4501780 | 310.2.1.5 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › DUF842 | 0.51 | 42.0 | 4.07e-01 | 86.7% | 90.4% |
D4
medium
residues 88-163
Domain cluster:
representative
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 51.0 | 5.17e-01 | 93.4% | 66.7% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.74 | 55.0 | 5.74e-01 | 98.7% | 84.5% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.74 | 53.0 | 5.14e-01 | 100.0% | 66.7% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.73 | 47.0 | 4.81e-01 | 85.5% | 67.6% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.73 | 53.0 | 4.84e-01 | 90.8% | 58.6% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.72 | 59.0 | 4.00e-01 | 100.0% | 25.6% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 53.0 | 4.96e-01 | 100.0% | 66.3% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 59.0 | 6.12e-01 | 98.7% | 100.0% |
| 2b6cA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.68 | 36.0 | 3.30e-01 | 82.9% | 38.1% |
| 6v3zA00 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.68 | 49.0 | 3.70e-01 | 75.0% | 40.4% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.68 | 57.0 | 5.80e-01 | 100.0% | 95.9% |
| 6whbA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 45.0 | 3.09e-01 | 100.0% | 19.1% |
| 3t98B00 | 6.10.140.1350 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 59.0 | 5.66e-01 | 98.7% | 84.9% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 53.0 | 5.60e-01 | 98.7% | 98.5% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 58.0 | 4.13e-01 | 98.7% | 34.3% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 49.0 | 4.89e-01 | 100.0% | 77.5% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.65 | 59.0 | 5.12e-01 | 100.0% | 66.4% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 41.0 | 4.08e-01 | 86.8% | 60.8% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 57.0 | 5.68e-01 | 100.0% | 96.1% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.64 | 54.0 | 3.56e-01 | 93.4% | 65.7% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.63 | 55.0 | 5.47e-01 | 94.7% | 92.5% |
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.63 | 55.0 | 4.93e-01 | 94.7% | 70.2% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.63 | 49.0 | 5.01e-01 | 97.4% | 86.5% |
| 4lwsB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 54.0 | 5.20e-01 | 97.4% | 83.0% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 56.0 | 3.92e-01 | 98.7% | 32.9% |
| 3cqxC00 | 1.20.58.890 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 52.0 | 5.10e-01 | 93.4% | 84.0% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.62 | 56.0 | 4.85e-01 | 100.0% | 86.1% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 55.0 | 4.77e-01 | 100.0% | 75.0% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 54.0 | 4.37e-01 | 97.4% | 55.1% |
| 1x3kA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 41.0 | 3.32e-01 | 93.4% | 35.4% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.61 | 53.0 | 4.43e-01 | 97.4% | 56.3% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 52.0 | 5.24e-01 | 98.7% | 91.0% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 54.0 | 5.33e-01 | 100.0% | 97.5% |
| 3ibpA01 | 1.20.58.850 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 51.0 | 5.23e-01 | 92.1% | 95.8% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.61 | 47.0 | 4.65e-01 | 82.9% | 84.8% |
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.61 | 53.0 | 3.51e-01 | 98.7% | 35.1% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.60 | 53.0 | 5.03e-01 | 98.7% | 86.7% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.60 | 53.0 | 5.23e-01 | 100.0% | 92.7% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 52.0 | 4.79e-01 | 97.4% | 85.0% |
| 4py6C00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.60 | 52.0 | 4.42e-01 | 98.7% | 93.7% |
| 7b00A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.60 | 49.0 | 3.03e-01 | 100.0% | 15.2% |
| 1u3dA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 40.0 | 3.45e-01 | 92.1% | 40.3% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.59 | 53.0 | 5.17e-01 | 100.0% | 97.6% |
| 3lszA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 50.0 | 4.29e-01 | 100.0% | 58.4% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 51.0 | 4.52e-01 | 97.4% | 82.1% |
| 2vf8B02 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.58 | 51.0 | 4.03e-01 | 98.7% | 99.4% |
| 3zbhA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 51.0 | 4.90e-01 | 100.0% | 88.9% |
| 3g9gA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 51.0 | 3.59e-01 | 100.0% | 44.4% |
| 1otkA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 49.0 | 3.56e-01 | 100.0% | 75.0% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.58 | 44.0 | 4.33e-01 | 98.7% | 76.5% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.58 | 51.0 | 4.21e-01 | 97.4% | 73.7% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.57 | 46.0 | 4.80e-01 | 96.1% | 100.0% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.57 | 45.0 | 4.56e-01 | 98.7% | 89.2% |
| 1qrvA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.57 | 46.0 | 4.71e-01 | 90.8% | 94.5% |
| 2vf7B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 51.0 | 3.33e-01 | 100.0% | 46.0% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.55 | 46.0 | 3.90e-01 | 96.1% | 63.9% |
| 2fzlA02 | 6.10.140.1180 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 41.0 | 4.39e-01 | 85.5% | 98.4% |
| 2nsfA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.54 | 46.0 | 3.68e-01 | 98.7% | 68.6% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.53 | 45.0 | 4.21e-01 | 97.4% | 75.0% |
| 1jadA00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.52 | 45.0 | 3.17e-01 | 96.1% | 30.6% |
| 5zr4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.60e-01 | 81.6% | 59.8% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036728 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.77 | 49.0 | 5.08e-01 | 89.5% | 70.0% |
| 3847053 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.71 | 53.0 | 5.36e-01 | 100.0% | 80.0% |
| 3182561 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 52.0 | 4.06e-01 | 100.0% | 38.8% |
| 3654060 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.67 | 46.0 | 3.30e-01 | 92.1% | 24.0% |
| 3770066 | 3291.1.1.169 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › KIF21A_4th | 0.66 | 61.0 | 4.41e-01 | 100.0% | 45.6% |
| 3908132 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 59.0 | 4.02e-01 | 98.7% | 29.5% |
| 3913300 | 3755.3.1.303 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th | 0.65 | 59.0 | 4.68e-01 | 100.0% | 51.3% |
| 3562849 | 148.1.3.254 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KIF21A_4th | 0.64 | 59.0 | 4.12e-01 | 100.0% | 33.5% |
| 3939746 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.64 | 57.0 | 4.35e-01 | 98.7% | 45.7% |
| 4018084 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 53.0 | 5.52e-01 | 89.5% | 100.0% |
| 3639878 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 53.0 | 4.94e-01 | 90.8% | 74.7% |
| 3200117 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.64 | 55.0 | 4.42e-01 | 93.4% | 50.7% |
| 4957689 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.64 | 51.0 | 4.27e-01 | 100.0% | 50.8% |
| 3471023 | 164.1.1.15 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › PPPI_inhib | 0.64 | 57.0 | 4.43e-01 | 98.7% | 47.5% |
| 3223457 | 101.1.2.661 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD | 0.64 | 57.0 | 3.84e-01 | 100.0% | 36.8% |
| 4012743 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 55.0 | 4.23e-01 | 100.0% | 95.0% |
| 4026286 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.63 | 56.0 | 4.63e-01 | 98.7% | 80.0% |
| 3792423 | 4207.1.1.38 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › PF30341 | 0.63 | 54.0 | 4.47e-01 | 92.1% | 53.8% |
| 1693762 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.63 | 56.0 | 4.42e-01 | 98.7% | 49.0% |
| 3987991 | 5086.1.1.94 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HB_LcnD | 0.63 | 56.0 | 4.05e-01 | 98.7% | 100.0% |
| 3488191 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 53.0 | 4.98e-01 | 93.4% | 76.8% |
| 4968655 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 56.0 | 4.44e-01 | 100.0% | 50.3% |
| 3458695 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 50.0 | 5.24e-01 | 86.8% | 97.1% |
| 3623411 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 56.0 | 5.19e-01 | 100.0% | 100.0% |
| 4324499 | 3755.1.1.3 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › SPAM | 0.62 | 56.0 | 4.52e-01 | 100.0% | 69.0% |
| 3775225 | 3755.1.1.6 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › USHBP1_PDZ-bd | 0.62 | 56.0 | 4.32e-01 | 100.0% | 47.3% |
| 4092397 | 109.4.1.1448 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_7, TPR_10, TPR_12, TPR_MalT | 0.62 | 55.0 | 3.36e-01 | 98.7% | 16.6% |
| 4946656 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 54.0 | 4.68e-01 | 98.7% | 75.8% |
| 3493493 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.62 | 55.0 | 4.89e-01 | 100.0% | 70.9% |
| 3940778 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 54.0 | 4.64e-01 | 100.0% | 63.2% |
| 4236657 | 633.21.1.18 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom | 0.61 | 53.0 | 4.26e-01 | 98.7% | 49.7% |
| 4016292 | 192.2.1.18 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING | 0.61 | 55.0 | 4.53e-01 | 100.0% | 57.8% |
| 4287748 | 603.1.1.128 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › MSP1_C | 0.61 | 54.0 | 3.79e-01 | 100.0% | 46.7% |
| 3661867 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.60 | 50.0 | 4.55e-01 | 90.8% | 69.0% |
| 3167394 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.60 | 53.0 | 3.67e-01 | 100.0% | 61.9% |
| 3762580 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.60 | 49.0 | 4.91e-01 | 93.4% | 88.7% |
| 3628093 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.59 | 53.0 | 4.76e-01 | 100.0% | 74.3% |
| 4217794 | 5086.1.1.94 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HB_LcnD | 0.59 | 52.0 | 4.46e-01 | 100.0% | 96.8% |
| 3714267 | 1075.4.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane_2 | 0.59 | 52.0 | 3.37e-01 | 100.0% | 34.2% |
| 3672297 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.58 | 52.0 | 4.86e-01 | 100.0% | 87.4% |
| 3246869 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.58 | 50.0 | 3.57e-01 | 97.4% | 31.2% |
| 4491672 | 601.7.1.6 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › GlnD_UR_UTase | 0.58 | 48.0 | 3.76e-01 | 90.8% | 67.5% |
| 3277600 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.58 | 51.0 | 3.37e-01 | 100.0% | 77.8% |
| 3773794 | 6170.1.1.25 ↗ | alpha bundles › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › PF30874 | 0.57 | 49.0 | 4.75e-01 | 100.0% | 88.2% |
| 3458081 | 109.4.1.543 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › efThoc1 | 0.57 | 48.0 | 3.61e-01 | 96.1% | 46.2% |
| 3519620 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.56 | 45.0 | 4.08e-01 | 89.5% | 63.6% |
| 4077080 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.56 | 48.0 | 3.37e-01 | 98.7% | 29.0% |
| 2145114 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.56 | 48.0 | 3.21e-01 | 100.0% | 35.8% |
| 4979047 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 48.0 | 3.82e-01 | 100.0% | 48.5% |
| 3288662 | 620.1.1.5 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › MDMPI_N | 0.55 | 48.0 | 3.84e-01 | 98.7% | 72.3% |
| 3591474 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.55 | 48.0 | 3.50e-01 | 100.0% | 76.4% |
| 3291596 | 150.5.1.52 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE | 0.55 | 47.0 | 4.34e-01 | 98.7% | 75.0% |
| 4946356 | 620.1.1.0 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases | 0.53 | 44.0 | 3.60e-01 | 92.1% | 77.2% |
| 3743940 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.53 | 46.0 | 3.69e-01 | 100.0% | 93.1% |
| 3612380 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.53 | 46.0 | 4.40e-01 | 97.4% | 83.3% |
| 3978753 | 3759.1.1.1 ↗ | alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antiterm | 0.52 | 45.0 | 3.81e-01 | 97.4% | 91.5% |
| 3960953 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.50 | 44.0 | 2.79e-01 | 96.1% | 21.3% |
| 5083333 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.50 | 42.0 | 3.36e-01 | 94.7% | 46.7% |
D5
medium
residues 164-248_401-419
Domain cluster:
representative
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qxbA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.65 | 50.0 | 3.61e-01 | 81.7% | 53.5% |
| 5vanA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 49.0 | 3.29e-01 | 81.7% | 43.3% |
| 6p8vA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 49.0 | 3.90e-01 | 81.7% | 50.7% |
| 4v2xA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 49.0 | 3.42e-01 | 81.7% | 51.8% |
| 3qyqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 48.0 | 3.58e-01 | 81.7% | 57.1% |
| 3m1rB01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.63 | 48.0 | 3.51e-01 | 81.7% | 51.7% |
| 4j3fA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 48.0 | 3.60e-01 | 81.7% | 72.6% |
| 4wiaC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 44.0 | 3.38e-01 | 73.1% | 73.0% |
| 2ayiA01 | 3.40.1830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) | 0.62 | 47.0 | 4.02e-01 | 81.7% | 76.0% |
| 8b73B01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 47.0 | 3.35e-01 | 81.7% | 67.0% |
| 7swlB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 47.0 | 4.03e-01 | 81.7% | 81.0% |
| 2cunA02 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.61 | 54.0 | 4.34e-01 | 97.1% | 99.0% |
| 4icsA01 | 3.40.1830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) | 0.61 | 46.0 | 3.90e-01 | 81.7% | 72.1% |
| 3ozoA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 52.0 | 3.58e-01 | 97.1% | 94.3% |
| 3d3aA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 48.0 | 3.54e-01 | 84.6% | 89.8% |
| 3milB00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.61 | 46.0 | 3.56e-01 | 81.7% | 36.1% |
| 8d89A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 52.0 | 3.54e-01 | 95.2% | 86.9% |
| 4k7jA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 45.0 | 3.50e-01 | 79.8% | 55.3% |
| 1e5nA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 45.0 | 3.16e-01 | 81.7% | 36.7% |
| 4f8xA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 45.0 | 3.20e-01 | 81.7% | 62.1% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 45.0 | 3.52e-01 | 81.7% | 52.7% |
| 5b5lA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 45.0 | 3.63e-01 | 81.7% | 68.1% |
| 3niyA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 48.0 | 3.38e-01 | 88.5% | 89.9% |
| 1c7sA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 50.0 | 3.29e-01 | 98.1% | 98.6% |
| 4ltyA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 50.0 | 3.70e-01 | 97.1% | 98.2% |
| 3av0A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 50.0 | 3.84e-01 | 97.1% | 98.4% |
| 3fbsB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 50.0 | 4.11e-01 | 95.2% | 97.3% |
| 3ndzA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 49.0 | 3.43e-01 | 94.2% | 90.1% |
| 2jieA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 50.0 | 3.31e-01 | 98.1% | 94.8% |
| 5bt8A02 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.57 | 50.0 | 3.93e-01 | 97.1% | 91.8% |
| 3q9cA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.56 | 43.0 | 3.04e-01 | 81.7% | 43.7% |
| 3tscA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 48.0 | 3.63e-01 | 96.2% | 95.9% |
| 2jepB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 49.0 | 3.43e-01 | 99.0% | 93.9% |
| 1dtnA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 45.0 | 3.52e-01 | 88.5% | 87.0% |
| 3qldA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 46.0 | 3.58e-01 | 90.4% | 88.3% |
| 1uf3A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.56 | 49.0 | 3.82e-01 | 98.1% | 99.1% |
| 4ntcA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 48.0 | 3.91e-01 | 98.1% | 95.5% |
| 3n8hA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 49.0 | 4.16e-01 | 100.0% | 92.0% |
| 4w88B00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 47.0 | 3.26e-01 | 92.3% | 94.1% |
| 3fkkA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 49.0 | 3.51e-01 | 99.0% | 99.3% |
| 1geqB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 48.0 | 3.63e-01 | 96.2% | 97.6% |
| 3nbkD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 48.0 | 4.14e-01 | 97.1% | 73.0% |
| 5bmoC00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.54 | 47.0 | 3.61e-01 | 96.2% | 94.2% |
| 2hzgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 43.0 | 3.32e-01 | 87.5% | 86.3% |
| 1n3lA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 46.0 | 3.76e-01 | 96.2% | 86.1% |
| 1khdD02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.54 | 47.0 | 3.69e-01 | 97.1% | 93.7% |
| 3aamA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 41.0 | 3.07e-01 | 81.7% | 61.3% |
| 1n0uA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 3.43e-01 | 86.5% | 71.0% |
| 1dctA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 41.0 | 3.46e-01 | 81.7% | 73.4% |
| 4ix1A00 | 3.40.50.12500 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 33.0 | 2.62e-01 | 80.8% | 27.4% |
| 2q2rA02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.53 | 40.0 | 3.27e-01 | 81.7% | 85.2% |
| 3co8A02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.53 | 40.0 | 3.19e-01 | 81.7% | 39.6% |
| 2vyoA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.53 | 46.0 | 3.70e-01 | 97.1% | 87.9% |
| 1wraA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 45.0 | 3.28e-01 | 96.2% | 70.3% |
| 4f6cB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 45.0 | 3.10e-01 | 96.2% | 67.9% |
| 2cycA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 44.0 | 3.50e-01 | 97.1% | 85.8% |
| 3elbA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 45.0 | 3.93e-01 | 99.0% | 78.8% |
| 1o5wA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 45.0 | 3.69e-01 | 99.0% | 100.0% |
| 3i8oA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.51 | 43.0 | 4.10e-01 | 95.2% | 100.0% |
| 5d8nA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 37.0 | 3.07e-01 | 76.0% | 78.7% |
| 3elbA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 44.0 | 4.05e-01 | 97.1% | 88.3% |
| 1ur1A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 43.0 | 3.10e-01 | 98.1% | 92.8% |
| 1ipaA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.51 | 44.0 | 3.89e-01 | 97.1% | 93.5% |
| 4epkB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.50 | 40.0 | 2.84e-01 | 85.6% | 90.6% |
| 3wsfA02 | 3.40.1390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › NIF3 (NGG1p interacting factor 3)-like | 0.50 | 36.0 | 3.48e-01 | 81.7% | 66.7% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3629727 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.71 | 55.0 | 4.16e-01 | 81.7% | 50.2% |
| 5070004 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 54.0 | 4.76e-01 | 81.7% | 87.3% |
| 4996622 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.68 | 53.0 | 4.28e-01 | 81.7% | 52.3% |
| 3255731 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.68 | 52.0 | 4.16e-01 | 81.7% | 57.6% |
| 5002767 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.67 | 52.0 | 4.27e-01 | 81.7% | 50.8% |
| 3717015 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.67 | 52.0 | 4.27e-01 | 81.7% | 54.1% |
| 4028442 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.66 | 51.0 | 4.18e-01 | 81.7% | 55.1% |
| 3275379 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.65 | 50.0 | 4.08e-01 | 81.7% | 49.2% |
| 3875443 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 49.0 | 3.61e-01 | 81.7% | 33.6% |
| 4011899 | 2006.1.5.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Arginase | 0.65 | 44.0 | 3.25e-01 | 71.2% | 69.0% |
| 3641662 | 2004.1.1.530 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_lid_3 | 0.64 | 49.0 | 3.42e-01 | 81.7% | 26.8% |
| 3480385 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 49.0 | 3.77e-01 | 81.7% | 39.2% |
| 3601397 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 49.0 | 3.50e-01 | 81.7% | 42.5% |
| 4016893 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.64 | 49.0 | 3.63e-01 | 81.7% | 35.3% |
| 4947766 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.64 | 49.0 | 3.92e-01 | 81.7% | 51.0% |
| 3609341 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.64 | 49.0 | 3.61e-01 | 81.7% | 34.6% |
| 5055179 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.63 | 48.0 | 3.82e-01 | 81.7% | 94.3% |
| 5024268 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.62 | 48.0 | 3.49e-01 | 81.7% | 55.3% |
| 2573569 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 47.0 | 3.59e-01 | 81.7% | 39.0% |
| 4997554 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.62 | 46.0 | 4.08e-01 | 77.9% | 98.0% |
| 3284433 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.62 | 46.0 | 3.29e-01 | 78.8% | 87.1% |
| 3589086 | 7590.1.1.1 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Peptidase_M29 | 0.61 | 47.0 | 3.92e-01 | 81.7% | 71.4% |
| 4936255 | 2004.1.1.202 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 | 0.61 | 44.0 | 3.59e-01 | 75.0% | 85.5% |
| 5004517 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.61 | 47.0 | 3.76e-01 | 81.7% | 73.8% |
| 4961847 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.61 | 51.0 | 4.05e-01 | 91.3% | 95.8% |
| 3500854 | 7529.1.1.11 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 | 0.61 | 47.0 | 3.22e-01 | 81.7% | 59.2% |
| 4330520 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.61 | 53.0 | 3.44e-01 | 97.1% | 24.3% |
| 3869764 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.60 | 53.0 | 4.08e-01 | 97.1% | 49.6% |
| 3510221 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.60 | 53.0 | 3.99e-01 | 96.2% | 46.8% |
| 4456464 | 2002.1.1.8 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase | 0.60 | 50.0 | 3.42e-01 | 91.3% | 90.9% |
| 5077987 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.60 | 44.0 | 3.54e-01 | 78.8% | 84.2% |
| 5036143 | 2004.1.1.1199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF499 | 0.60 | 45.0 | 3.26e-01 | 81.7% | 35.6% |
| 3487369 | 7529.1.1.11 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 | 0.59 | 46.0 | 3.54e-01 | 81.7% | 80.4% |
| 4635994 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.59 | 52.0 | 3.99e-01 | 97.1% | 53.8% |
| 4057956 | 2004.1.1.35 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA | 0.59 | 45.0 | 3.49e-01 | 81.7% | 53.0% |
| 4999337 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.58 | 45.0 | 3.97e-01 | 82.7% | 94.2% |
| 5048623 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.58 | 51.0 | 4.22e-01 | 96.2% | 67.2% |
| 5075755 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.58 | 51.0 | 4.40e-01 | 97.1% | 99.4% |
| 4979584 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.58 | 50.0 | 4.41e-01 | 96.2% | 81.9% |
| 5044659 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.57 | 45.0 | 3.62e-01 | 85.6% | 94.9% |
| 3949157 | 2005.1.1.35 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Citrate_ly_lig | 0.57 | 52.0 | 4.07e-01 | 100.0% | 73.5% |
| 4611002 | 2005.1.1.35 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Citrate_ly_lig | 0.57 | 51.0 | 4.06e-01 | 100.0% | 72.6% |
| 4157808 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.56 | 49.0 | 3.99e-01 | 97.1% | 83.5% |
| 3203047 | 2006.1.4.29 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN-like_DDX60 | 0.56 | 46.0 | 3.75e-01 | 92.3% | 78.6% |
| 3718981 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.56 | 47.0 | 3.97e-01 | 95.2% | 100.0% |
| 4991997 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.56 | 48.0 | 4.40e-01 | 95.2% | 88.6% |
| 3606754 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 48.0 | 3.80e-01 | 97.1% | 72.6% |
| 4173456 | 2484.1.1.211 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB | 0.56 | 41.0 | 3.40e-01 | 77.9% | 76.4% |
| 5058976 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.56 | 48.0 | 3.53e-01 | 97.1% | 94.1% |
| 4994780 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.55 | 47.0 | 3.80e-01 | 96.2% | 98.1% |
| 5043276 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.55 | 49.0 | 4.29e-01 | 96.2% | 79.1% |
| 3286637 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.55 | 41.0 | 3.58e-01 | 78.8% | 90.3% |
| 4298289 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.55 | 48.0 | 3.60e-01 | 97.1% | 98.9% |
| 3603327 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.55 | 45.0 | 3.11e-01 | 91.3% | 81.2% |
| 3178498 | 2484.1.1.57 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt | 0.55 | 48.0 | 3.55e-01 | 99.0% | 78.3% |
| 4934333 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.55 | 47.0 | 3.61e-01 | 96.2% | 97.6% |
| None | — | 0.55 | 47.0 | 3.53e-01 | 94.2% | 91.3% | |
| 4123648 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.55 | 48.0 | 4.08e-01 | 97.1% | 74.0% |
| 3956669 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.54 | 42.0 | 3.56e-01 | 82.7% | 90.0% |
| 5038403 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.54 | 41.0 | 3.48e-01 | 81.7% | 81.1% |
| 4440430 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.54 | 47.0 | 3.51e-01 | 95.2% | 94.7% |
| 4107596 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.54 | 46.0 | 3.28e-01 | 100.0% | 82.2% |
| 5071044 | 7601.1.1.2 ↗ | a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 | 0.54 | 46.0 | 3.23e-01 | 96.2% | 71.5% |
| 3512158 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.54 | 46.0 | 4.07e-01 | 94.2% | 83.3% |
| 3944963 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 41.0 | 3.36e-01 | 81.7% | 84.2% |
| 3602729 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.53 | 48.0 | 3.49e-01 | 98.1% | 89.6% |
| 4494002 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.53 | 39.0 | 3.80e-01 | 78.8% | 97.5% |
| 4083092 | 2005.1.1.21 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Pantoate_ligase | 0.53 | 47.0 | 3.98e-01 | 100.0% | 90.0% |
| 3795398 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.53 | 41.0 | 3.61e-01 | 86.5% | 81.2% |
| 3184194 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.52 | 44.0 | 3.73e-01 | 97.1% | 95.8% |
| 4180692 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.52 | 44.0 | 3.38e-01 | 93.3% | 95.4% |
| 3172513 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.52 | 44.0 | 3.80e-01 | 96.2% | 91.8% |
| 4667958 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 43.0 | 3.38e-01 | 92.3% | 96.2% |
| 5023003 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.52 | 45.0 | 4.19e-01 | 96.2% | 99.2% |
| 3602374 | 2002.1.1.418 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF7388 | 0.52 | 45.0 | 3.45e-01 | 93.3% | 97.8% |
| 3502906 | 2007.9.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › SEFIR | 0.52 | 38.0 | 3.49e-01 | 79.8% | 96.6% |
| 5014091 | 2002.1.1.447 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF5981 | 0.51 | 43.0 | 3.01e-01 | 91.3% | 77.4% |
| 3165826 | 2487.1.1.9 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Cyclase | 0.51 | 39.0 | 3.66e-01 | 81.7% | 81.5% |
| 5000484 | 2004.1.1.192 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 | 0.51 | 39.0 | 3.37e-01 | 82.7% | 98.8% |
| 1381490 | 2002.1.1.86 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_59 | 0.51 | 44.0 | 3.28e-01 | 100.0% | 90.8% |
| 2391702 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.51 | 40.0 | 3.08e-01 | 84.6% | 87.2% |
| 3364356 | 2488.1.1.12 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA | 0.50 | 42.0 | 4.01e-01 | 94.2% | 95.2% |