←Back to structures
S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00994
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00994
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 69-183
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00288__D47-185
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08805.17 best | PilS | 69.3 | 5.00e-19 | 100.0% | 79.7% |
| PF05307.17 | Bundlin | 37.7 | 3.40e-09 | 98.3% | 71.5% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fhvA00 | 3.30.1690.10 | Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › TcpA-like pilin | 0.80 | 75.0 | 6.77e-01 | 100.0% | 85.3% |
| 3s0tA00 | 3.30.1690.10 | Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › TcpA-like pilin | 0.74 | 68.0 | 5.82e-01 | 100.0% | 84.4% |
| 1oqvA00 | 3.30.1690.10 | Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › TcpA-like pilin | 0.73 | 67.0 | 5.85e-01 | 100.0% | 85.4% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 35.0 | 3.38e-01 | 98.3% | 46.2% |
| 4js8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 41.0 | 4.56e-01 | 97.4% | 85.4% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 42.0 | 4.62e-01 | 95.7% | 85.9% |
| 3v5qB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 38.0 | 4.28e-01 | 95.7% | 80.5% |
| 1yb3A00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 55.0 | 4.89e-01 | 99.1% | 81.2% |
| 3uimA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 36.0 | 4.00e-01 | 94.8% | 75.3% |
| 5suhB01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.59 | 37.0 | 3.97e-01 | 70.4% | 72.7% |
| 5suhA02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.58 | 38.0 | 4.03e-01 | 70.4% | 74.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3517458 | 274.1.1.10 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › PilS | 0.83 | 71.0 | 6.89e-01 | 100.0% | 82.4% |
| 149275 | 274.1.1.7 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › TcpA | 0.74 | 68.0 | 5.82e-01 | 100.0% | 84.4% |
| 4617348 | 274.1.1.7 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › TcpA | 0.73 | 67.0 | 5.75e-01 | 100.0% | 81.6% |
| 6675 | 274.1.1.10 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › PilS | 0.64 | 58.0 | 5.22e-01 | 100.0% | 84.6% |
| 3908678 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.60 | 41.0 | 2.54e-01 | 95.7% | 13.1% |
| 3462111 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.57 | 40.0 | 2.82e-01 | 94.8% | 23.4% |
| 3422152 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.56 | 37.0 | 2.68e-01 | 96.5% | 22.6% |
| 2994348 | 304.48.1.9 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1,CoV_RPol_N | 0.51 | 39.0 | 2.35e-01 | 96.5% | 10.3% |
| 4298978 | 3016.1.1.3 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_5 | 0.51 | 39.0 | 3.78e-01 | 100.0% | 72.2% |
D2
medium
residues 16-68
Domain cluster:
representative