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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01002
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01002
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 53-143_184-195_222-233
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5lvxC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 36.0 | 3.74e-01 | 75.7% | 52.8% |
| 4oifA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.67 | 37.0 | 4.88e-01 | 76.5% | 100.0% |
| 2wc7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 35.0 | 4.08e-01 | 73.9% | 83.5% |
| 3e38A02 | 2.60.40.3090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 37.0 | 4.36e-01 | 81.7% | 92.4% |
| 4nzjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 39.0 | 4.47e-01 | 76.5% | 90.8% |
| 3zo9B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 40.0 | 4.39e-01 | 75.7% | 88.4% |
| 7uzsX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 4.35e-01 | 80.0% | 96.5% |
| 2je8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 4.53e-01 | 80.0% | 98.0% |
| 4kkpA02 | 2.60.40.3880 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 44.0 | 4.47e-01 | 83.5% | 97.3% |
| 3wdhA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 34.0 | 3.89e-01 | 75.7% | 84.5% |
| 4cvuA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.29e-01 | 80.9% | 100.0% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 36.0 | 3.87e-01 | 81.7% | 83.3% |
| 2e8yA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 35.0 | 3.86e-01 | 75.7% | 86.7% |
| 2l0dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 4.04e-01 | 81.7% | 90.4% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 4.15e-01 | 82.6% | 89.0% |
| 1kv3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 3.92e-01 | 82.6% | 97.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3704825 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.73 | 58.0 | 4.93e-01 | 83.5% | 92.8% |
| 4020959 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 56.0 | 4.75e-01 | 86.1% | 96.1% |
| 3580553 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.67 | 37.0 | 3.02e-01 | 76.5% | 29.6% |
| 4008097 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 35.0 | 4.46e-01 | 73.9% | 92.8% |
| 3546196 | 11.1.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M | 0.61 | 40.0 | 4.60e-01 | 75.7% | 93.8% |
| 3066238 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.61 | 36.0 | 4.29e-01 | 76.5% | 87.0% |
| 4944382 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 4.52e-01 | 84.3% | 99.3% |
| 3723451 | 11.1.8.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Ctag/Cox11 (Pfam 04442) › PF26283 | 0.59 | 41.0 | 4.28e-01 | 71.3% | 100.0% |
| 3925422 | 10.15.1.3 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › PF26741 | 0.58 | 40.0 | 4.26e-01 | 81.7% | 81.0% |
| 3511206 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.55 | 27.0 | 3.26e-01 | 80.9% | 70.0% |
| 5071541 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 4.26e-01 | 81.7% | 100.0% |
| 3387208 | 11.1.1.148 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FixG_C | 0.53 | 41.0 | 3.95e-01 | 81.7% | 90.0% |
| 3700322 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.31e-01 | 86.1% | 94.0% |
| 4989772 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 4.19e-01 | 79.1% | 100.0% |
| 3927075 | 11.1.1.857 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7584 | 0.51 | 38.0 | 3.86e-01 | 79.1% | 96.5% |
| 4941303 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.80e-01 | 81.7% | 79.2% |
D2
medium
residues 144-183_196-221
Domain cluster:
representative