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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01030
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01030
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-120
Domain cluster:
rep: IMGVR_UViG_3300005099_000193-3300005099-Ga0072682_1022089__D28-116
D2
high
residues 125-237
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l6hA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.57 | 41.0 | 3.70e-01 | 75.2% | 80.5% |
| 4xriA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 41.0 | 2.47e-01 | 77.0% | 33.4% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.56 | 44.0 | 3.79e-01 | 85.0% | 68.3% |
| 4i2zA02 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 39.0 | 2.79e-01 | 76.1% | 44.8% |
| 1qgrA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 40.0 | 2.43e-01 | 79.6% | 23.5% |
| 2o5hA00 | 1.10.3510.10 | Mainly Alpha › Orthogonal Bundle › NMB0513-like › NMB0513-like | 0.53 | 41.0 | 3.99e-01 | 97.3% | 74.2% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.52 | 37.0 | 3.95e-01 | 72.6% | 94.7% |
| 2x0cA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.52 | 36.0 | 3.16e-01 | 71.7% | 68.0% |
| 4dvgB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.50 | 39.0 | 2.95e-01 | 85.0% | 58.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3186734 | 109.4.1.1259 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PBS, HEAT_2 | 0.58 | 46.0 | 3.36e-01 | 85.8% | 54.0% |
| 3174496 | 109.4.1.46 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N | 0.58 | 42.0 | 3.00e-01 | 76.1% | 36.2% |
| 3569307 | 109.4.1.46 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N | 0.57 | 43.0 | 2.95e-01 | 78.8% | 35.7% |
| 4945937 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 46.0 | 4.27e-01 | 86.7% | 86.9% |
| 4029217 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.55 | 44.0 | 3.22e-01 | 86.7% | 54.2% |
| 5057127 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 39.0 | 3.07e-01 | 75.2% | 48.6% |
| 3496535 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 42.0 | 3.51e-01 | 86.7% | 75.8% |
| 3631631 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 43.0 | 3.20e-01 | 89.4% | 96.8% |
| 5011899 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.53 | 38.0 | 3.29e-01 | 76.1% | 80.5% |
| 5064562 | 177.1.1.1 ↗ | alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Zn_dep_PLPC | 0.53 | 47.0 | 3.53e-01 | 99.1% | 92.4% |
| 3583943 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.53 | 42.0 | 3.55e-01 | 86.7% | 56.0% |
| 3176866 | 109.4.1.229 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SIL1 | 0.50 | 38.0 | 2.84e-01 | 80.5% | 45.7% |
| 5053950 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.50 | 34.0 | 2.55e-01 | 89.4% | 26.6% |
| 3780963 | 109.4.1.1465 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, TPR_IPO11 | 0.50 | 40.0 | 2.44e-01 | 87.6% | 27.9% |
D3
high
residues 267-361
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 46.0 | 4.04e-01 | 75.8% | 64.1% |
| 1sigA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.63 | 51.0 | 3.63e-01 | 88.4% | 73.1% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 43.0 | 4.57e-01 | 88.4% | 84.1% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.61 | 42.0 | 3.38e-01 | 71.6% | 76.8% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 44.0 | 4.10e-01 | 77.9% | 100.0% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 34.0 | 3.63e-01 | 92.6% | 66.7% |
| 1wjtA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.56 | 33.0 | 3.21e-01 | 90.5% | 51.5% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.56 | 36.0 | 3.71e-01 | 81.1% | 68.5% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 43.0 | 3.27e-01 | 85.3% | 86.5% |
| 1sg6A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.54 | 46.0 | 3.68e-01 | 100.0% | 45.7% |
| 3mg2B01 | 1.10.2090.10 | Mainly Alpha › Orthogonal Bundle › orange carotenoid protein, domain 2 › Orange carotenoid-binding protein, N-terminal domain | 0.54 | 37.0 | 3.22e-01 | 77.9% | 46.3% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 37.0 | 3.30e-01 | 70.5% | 61.2% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.53 | 43.0 | 3.50e-01 | 91.6% | 67.9% |
| 1qdbA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 37.0 | 3.26e-01 | 72.6% | 75.5% |
| 3sqnA02 | 1.10.1790.40 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › | 0.52 | 42.0 | 4.00e-01 | 91.6% | 72.9% |
| 1kz7A01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.52 | 37.0 | 3.02e-01 | 76.8% | 62.2% |
| 2xgjA04 | 1.20.1500.20 | Mainly Alpha › Up-down Bundle › YheA-like fold › | 0.51 | 41.0 | 3.79e-01 | 91.6% | 76.5% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 39.0 | 3.18e-01 | 84.2% | 87.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3801576 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.64 | 38.0 | 3.82e-01 | 76.8% | 56.0% |
| 3267463 | 605.6.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like | 0.61 | 43.0 | 4.26e-01 | 73.7% | 97.0% |
| 3988434 | 633.2.1.0 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein | 0.61 | 40.0 | 3.92e-01 | 71.6% | 61.5% |
| 3615596 | 3758.1.1.0 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins | 0.61 | 54.0 | 3.95e-01 | 100.0% | 70.0% |
| 3601526 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.57 | 45.0 | 2.86e-01 | 89.5% | 24.5% |
| 3837909 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 39.0 | 3.06e-01 | 74.7% | 40.0% |
| 3198443 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 2.70e-01 | 91.6% | 38.8% |
| 3707613 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.54 | 40.0 | 3.00e-01 | 77.9% | 56.8% |
| 3369451 | 192.2.1.35 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Hobbit | 0.54 | 38.0 | 3.52e-01 | 72.6% | 85.0% |
| 3953503 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.53 | 41.0 | 2.78e-01 | 85.3% | 58.5% |
| 4154807 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.53 | 37.0 | 2.69e-01 | 72.6% | 63.6% |
| 3743598 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 39.0 | 3.61e-01 | 80.0% | 69.6% |
| 4108474 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.52 | 36.0 | 3.43e-01 | 71.6% | 87.8% |
| 4374392 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.52 | 41.0 | 2.72e-01 | 85.3% | 42.7% |
| 3461725 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.52 | 45.0 | 4.20e-01 | 100.0% | 85.0% |
| 4623646 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.51 | 44.0 | 2.99e-01 | 100.0% | 97.0% |
| 3719227 | 109.4.1.623 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd1 | 0.51 | 41.0 | 2.69e-01 | 88.4% | 31.0% |
| 4030141 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.51 | 38.0 | 3.59e-01 | 98.9% | 66.4% |