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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01050
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01050
Identity
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-121
Domain cluster:
rep: aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single.1__X__X__00033__D71-188
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04519.20 best | Bactofilin | 69.2 | 4.20e-19 | 98.1% | 98.0% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i84A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.84 | 78.0 | 5.51e-01 | 100.0% | 54.7% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.83 | 77.0 | 5.41e-01 | 100.0% | 56.6% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.83 | 77.0 | 4.84e-01 | 100.0% | 23.0% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.81 | 75.0 | 6.10e-01 | 100.0% | 76.2% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 74.0 | 5.58e-01 | 100.0% | 79.1% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.79 | 72.0 | 5.19e-01 | 100.0% | 60.4% |
| 2yuhA01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.76 | 69.0 | 5.82e-01 | 100.0% | 76.7% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.74 | 67.0 | 5.86e-01 | 100.0% | 73.2% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.74 | 66.0 | 5.20e-01 | 100.0% | 52.8% |
| 3jx8A00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.72 | 65.0 | 4.92e-01 | 100.0% | 69.6% |
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 64.0 | 4.35e-01 | 100.0% | 34.8% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 58.0 | 5.76e-01 | 92.3% | 97.2% |
| 2r8bA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 52.0 | 4.20e-01 | 92.3% | 66.7% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838073 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.98 | 90.0 | 9.27e-01 | 99.0% | 98.0% |
| 3945380 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.98 | 91.0 | 9.33e-01 | 99.0% | 99.0% |
| 4378528 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.97 | 90.0 | 9.22e-01 | 99.0% | 99.0% |
| 3974743 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.97 | 91.0 | 9.28e-01 | 99.0% | 100.0% |
| 2516583 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.96 | 80.0 | 8.65e-01 | 89.4% | 98.9% |
| 1720156 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.93 | 84.0 | 8.44e-01 | 100.0% | 95.1% |
| 4307386 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.89 | 78.0 | 6.20e-01 | 100.0% | 50.8% |
| 5007613 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.89 | 81.0 | 7.49e-01 | 100.0% | 78.1% |
| 5050663 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.85 | 80.0 | 5.99e-01 | 100.0% | 48.5% |
| 4971789 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.85 | 77.0 | 7.05e-01 | 100.0% | 76.9% |
| 4981608 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.84 | 79.0 | 6.49e-01 | 100.0% | 78.9% |
| 5078879 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.83 | 77.0 | 6.10e-01 | 100.0% | 54.5% |
| 5006686 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.83 | 76.0 | 7.34e-01 | 98.1% | 87.0% |
| 1503840 | 207.13.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix | 0.82 | 76.0 | 5.12e-01 | 100.0% | 35.5% |
| 4964741 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.82 | 65.0 | 6.97e-01 | 83.7% | 97.8% |
| 4932011 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.82 | 77.0 | 7.38e-01 | 98.1% | 90.4% |
| 5032703 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.81 | 77.0 | 7.38e-01 | 99.0% | 91.3% |
| 3606189 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.81 | 76.0 | 5.22e-01 | 100.0% | 33.1% |
| 3840065 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.81 | 73.0 | 5.51e-01 | 100.0% | 43.7% |
| 5020283 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.80 | 75.0 | 6.95e-01 | 98.1% | 84.0% |
| 5002393 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.80 | 74.0 | 7.06e-01 | 98.1% | 88.3% |
| 3741632 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.80 | 67.0 | 6.84e-01 | 100.0% | 94.0% |
| 4949774 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.79 | 70.0 | 6.26e-01 | 100.0% | 69.0% |
| 3744798 | 208.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DUF1720 | 0.79 | 68.0 | 5.95e-01 | 100.0% | 64.0% |
| 3498904 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.79 | 72.0 | 5.12e-01 | 100.0% | 46.0% |
| 3963707 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.78 | 58.0 | 6.43e-01 | 85.6% | 100.0% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.77 | 71.0 | 6.35e-01 | 100.0% | 73.6% |
| 3577699 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.76 | 70.0 | 6.13e-01 | 100.0% | 81.3% |
| 3716374 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.75 | 69.0 | 5.32e-01 | 100.0% | 64.9% |
| 3713639 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.74 | 67.0 | 5.06e-01 | 100.0% | 46.8% |
| 998972 | 207.2.1.18 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DUF2807 | 0.74 | 66.0 | 5.20e-01 | 100.0% | 52.8% |
| 3246091 | 389.1.1.157 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Epiglycanin_TR | 0.74 | 59.0 | 4.90e-01 | 85.6% | 95.6% |
| 3254341 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 68.0 | 4.93e-01 | 100.0% | 40.4% |
| 4643528 | 208.2.1.11 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Ice_nucleation | 0.68 | 58.0 | 5.71e-01 | 100.0% | 87.3% |
| 3175357 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.50 | 45.0 | 4.03e-01 | 100.0% | 93.8% |