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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01068

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01068

Identity

Kingdom:
phage

Quality

80.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 83-224
PDB
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q8rA00 3.30.1330.70 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Holliday junction resolvase RusA 0.73 58.0 6.27e-01 85.2% 98.3%
1ofuA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.67 42.0 5.09e-01 84.5% 96.8%
1w5eB02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.66 42.0 4.73e-01 84.5% 84.0%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.66 21.0 3.64e-01 98.6% 85.4%
1w5fA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.66 43.0 4.67e-01 86.6% 78.3%
5hy0A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.65 44.0 4.99e-01 86.6% 90.7%
4nq3A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.65 43.0 4.93e-01 86.6% 94.9%
5hweA01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.65 44.0 4.91e-01 86.6% 90.7%
2r75102 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.64 41.0 4.56e-01 88.7% 82.7%
3oonA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.63 48.0 5.22e-01 92.3% 99.1%
3mcqA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.62 42.0 4.32e-01 86.6% 72.4%
2zovA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.61 50.0 4.75e-01 94.4% 74.1%
1yawB01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.61 44.0 4.52e-01 89.4% 78.4%
4ei7B01 3.30.1330.190 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.61 45.0 4.47e-01 83.8% 74.1%
5m38C00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.60 46.0 4.99e-01 85.2% 99.1%
4pl9A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 36.0 3.55e-01 97.2% 54.7%
2yxzD01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.60 44.0 4.42e-01 90.1% 76.1%
3cb2A02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.59 40.0 4.64e-01 83.1% 100.0%
6c98A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 30.0 3.54e-01 98.6% 72.5%
5l16A01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.58 44.0 4.73e-01 89.4% 93.5%
3cypB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.58 43.0 4.47e-01 90.1% 85.3%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.57 46.0 4.83e-01 86.6% 96.2%
5wtpA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.57 46.0 4.91e-01 88.0% 100.0%
1dihA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 37.0 4.16e-01 93.0% 88.0%
3kizA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.55 46.0 4.63e-01 89.4% 93.6%
6aeoB01 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.55 45.0 4.64e-01 93.0% 94.8%
2iu4A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.54 43.0 4.30e-01 100.0% 80.8%
3c8lB00 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.53 41.0 4.48e-01 85.2% 96.6%
2rb9A01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.53 39.0 3.96e-01 86.6% 76.4%
3vpaB00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.52 44.0 3.56e-01 92.3% 51.1%
5dcaA08 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 29.0 3.27e-01 100.0% 69.1%
3zidB00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.52 43.0 3.21e-01 92.3% 36.3%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.52 45.0 4.34e-01 100.0% 82.7%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4537541 301.4.1.0 a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA 0.78 63.0 6.81e-01 85.2% 100.0%
3982309 301.4.1.1 a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.76 59.0 6.42e-01 84.5% 95.8%
4156345 301.4.1.1 a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.73 58.0 6.25e-01 84.5% 97.5%
318712 301.4.1.1 a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.72 57.0 6.13e-01 85.2% 96.7%
5083025 301.4.1.1 a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.71 58.0 6.14e-01 85.2% 99.2%
4948315 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.69 42.0 5.23e-01 85.9% 100.0%
4936949 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.68 44.0 4.54e-01 86.6% 68.1%
3672045 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.68 44.0 4.35e-01 86.6% 61.3%
3322800 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.68 44.0 4.79e-01 85.9% 78.3%
5036075 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.67 42.0 4.51e-01 86.6% 73.1%
4996655 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.67 45.0 4.88e-01 86.6% 83.5%
4948826 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.67 41.0 5.02e-01 83.1% 97.8%
4983214 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.67 44.0 4.65e-01 85.9% 75.2%
4995396 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.66 44.0 4.58e-01 86.6% 71.9%
4435605 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.66 32.0 3.78e-01 100.0% 65.0%
4983100 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.65 43.0 4.74e-01 85.9% 81.7%
5060753 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.65 44.0 4.77e-01 88.0% 83.5%
3258997 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.65 42.0 4.66e-01 85.2% 80.9%
3339457 301.13.1.2 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.63 43.0 4.98e-01 88.0% 100.0%
5011427 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.62 44.0 4.86e-01 89.4% 93.6%
4274861 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 42.0 4.17e-01 86.6% 66.7%
4540637 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 42.0 4.24e-01 86.6% 72.1%
4945984 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.60 30.0 3.66e-01 100.0% 73.9%
3386046 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 43.0 4.53e-01 89.4% 84.0%
4172022 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 41.0 4.28e-01 86.6% 76.2%
4346934 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.60 44.0 4.78e-01 85.9% 94.8%
5048601 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.59 28.0 3.29e-01 96.5% 62.6%
4948829 304.111.1.4 a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS 0.59 43.0 3.43e-01 88.7% 37.5%
5044931 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.59 43.0 4.41e-01 90.1% 77.9%
4983512 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.59 44.0 4.45e-01 90.1% 78.6%
3650059 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.58 28.0 3.53e-01 95.8% 76.2%
3386253 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.58 44.0 4.38e-01 85.9% 77.2%
2798263 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.58 47.0 4.65e-01 93.7% 83.2%
3641694 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.57 27.0 3.12e-01 95.8% 57.1%
3205200 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 29.0 3.72e-01 95.1% 83.5%
3937552 301.13.1.2 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.56 42.0 4.33e-01 100.0% 81.5%
4382095 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.56 44.0 4.36e-01 89.4% 78.7%
3968618 4143.1.1.1 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.56 35.0 4.11e-01 81.0% 95.6%
4600934 4143.1.1.0 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like 0.56 34.0 4.11e-01 80.3% 98.8%
1680349 301.7.1.5 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › FkbO_Hyg5-like_N 0.56 48.0 4.21e-01 92.3% 69.5%
3307802 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.56 27.0 3.21e-01 97.2% 67.0%
3528491 301.13.1.2 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.55 45.0 4.45e-01 88.0% 86.5%
3593859 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.55 29.0 3.24e-01 99.3% 63.8%
3171307 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.55 29.0 3.20e-01 99.3% 60.9%
3416676 301.7.1.0 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.55 48.0 4.77e-01 95.1% 91.7%
1098403 301.7.1.5 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › FkbO_Hyg5-like_N 0.55 47.0 4.12e-01 92.3% 69.0%
5065901 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.55 45.0 4.51e-01 90.1% 89.0%
4880291 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.54 42.0 4.34e-01 86.6% 87.9%
3811404 301.13.1.2 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.54 44.0 4.26e-01 88.0% 81.2%
3713598 301.13.1.2 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.53 44.0 4.15e-01 88.7% 81.1%
3797622 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.53 43.0 4.31e-01 88.0% 87.3%
3592363 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.53 44.0 4.50e-01 100.0% 92.1%
3361675 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.52 44.0 4.36e-01 94.4% 89.3%
2773879 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.51 43.0 4.25e-01 90.8% 92.0%
4381590 301.13.1.2 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.51 43.0 4.18e-01 89.4% 89.7%
4526786 301.6.1.9 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin 0.51 42.0 3.10e-01 91.5% 34.2%
4020561 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.51 28.0 3.17e-01 99.3% 70.0%
3950725 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.51 46.0 4.22e-01 100.0% 93.7%
4947589 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.51 46.0 4.19e-01 100.0% 91.6%
4972086 301.2.1.0 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.51 42.0 3.60e-01 90.1% 85.7%
4360891 301.2.1.0 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.51 45.0 3.80e-01 100.0% 69.6%
5083178 301.2.1.0 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.50 45.0 4.08e-01 100.0% 90.5%
4200664 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.50 46.0 4.16e-01 100.0% 89.5%
4979713 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.50 42.0 4.26e-01 92.3% 89.7%
4982903 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.50 42.0 4.19e-01 92.3% 89.3%