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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01070
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01070
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-186
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 29.0 | 3.68e-01 | 87.9% | 87.3% |
| 5w3xD01 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.52 | 22.0 | 3.35e-01 | 82.1% | 100.0% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.50 | 31.0 | 3.77e-01 | 89.0% | 99.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3231315 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.61 | 31.0 | 4.34e-01 | 71.7% | 100.0% |
| 4981234 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.60 | 24.0 | 3.89e-01 | 89.0% | 100.0% |
| 3926387 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.60 | 31.0 | 4.24e-01 | 72.3% | 100.0% |
| 3231135 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 34.0 | 4.15e-01 | 79.8% | 89.1% |
| 3300056 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.57 | 28.0 | 3.77e-01 | 74.6% | 90.6% |
| 3261701 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 32.0 | 3.95e-01 | 73.4% | 87.6% |
| 4606510 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.57 | 29.0 | 3.95e-01 | 74.6% | 98.8% |
| 3817265 | 319.1.1.15 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF27746 | 0.53 | 30.0 | 3.75e-01 | 83.2% | 91.4% |
| 3651563 | 220.1.1.181 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_ULP | 0.52 | 34.0 | 3.93e-01 | 79.2% | 92.0% |
| 3929202 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.51 | 30.0 | 3.75e-01 | 96.5% | 96.2% |