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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01088
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01088
Identity
- Kingdom:
- phage
Quality
63.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-145
Domain cluster:
rep: Ig7659_scaffold_8_prodigal-single.1__X__X__00097__D22-145
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3safB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 53.0 | 4.28e-01 | 92.8% | 70.4% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 41.0 | 3.74e-01 | 71.9% | 98.9% |
| 3bexA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 42.0 | 4.23e-01 | 76.3% | 100.0% |
| 4mdaA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.96e-01 | 95.7% | 86.5% |
| 3lkbA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 46.0 | 3.98e-01 | 100.0% | 86.0% |
| 3f2kB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 4.10e-01 | 98.6% | 83.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3489407 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.64 | 34.0 | 4.31e-01 | 97.1% | 87.5% |
| 3956762 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.62 | 52.0 | 4.53e-01 | 91.4% | 78.1% |
| 3520351 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.61 | 33.0 | 3.97e-01 | 98.6% | 78.9% |
| 4356513 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.61 | 33.0 | 4.15e-01 | 84.2% | 87.1% |
| 3564521 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.60 | 42.0 | 3.64e-01 | 71.2% | 67.1% |
| 3856885 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 42.0 | 3.66e-01 | 71.2% | 69.3% |
| 3565215 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 40.0 | 3.78e-01 | 73.4% | 83.4% |
| 3924707 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.56 | 40.0 | 3.97e-01 | 74.1% | 96.0% |
| 3935879 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 39.0 | 3.55e-01 | 73.4% | 76.4% |
| 3650087 | 7512.1.1.27 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › O-FucT | 0.55 | 39.0 | 3.36e-01 | 72.7% | 62.3% |
| 3597832 | 148.1.1.20 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone_H2A_C | 0.52 | 35.0 | 3.98e-01 | 83.5% | 90.5% |
| 3878938 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 45.0 | 4.12e-01 | 97.1% | 97.3% |
| 3467205 | 192.18.1.0 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like | 0.51 | 45.0 | 3.14e-01 | 98.6% | 72.5% |
D2
high
residues 153-166_186-353
D3
medium
residues 447-505