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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01093
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01093
Identity
- Kingdom:
- phage
Quality
51.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 332-378
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 41.0 | 3.91e-01 | 87.2% | 52.7% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 42.0 | 4.49e-01 | 100.0% | 89.7% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 3.65e-01 | 100.0% | 44.6% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.55 | 44.0 | 4.01e-01 | 93.6% | 69.7% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 46.0 | 4.12e-01 | 95.7% | 71.2% |
| 4jn3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 38.0 | 2.57e-01 | 87.2% | 54.7% |
| 3rayA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.51 | 40.0 | 2.82e-01 | 89.4% | 32.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508175 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.74 | 55.0 | 5.41e-01 | 83.0% | 88.0% |
| 4369033 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.67 | 51.0 | 4.14e-01 | 85.1% | 62.1% |
| 3326231 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 53.0 | 3.41e-01 | 100.0% | 58.6% |
| 5064515 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.62 | 49.0 | 4.55e-01 | 93.6% | 68.3% |
| 3858885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 3.87e-01 | 91.5% | 63.6% |
| 4256943 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.57 | 40.0 | 2.94e-01 | 100.0% | 25.7% |
| 3932190 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.57 | 39.0 | 4.24e-01 | 89.4% | 97.1% |
| 5028924 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 43.0 | 3.24e-01 | 91.5% | 88.5% |
| 4945472 | 2003.1.5.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Fibrillarin | 0.55 | 38.0 | 2.50e-01 | 72.3% | 39.9% |
| 3993240 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.54 | 42.0 | 2.70e-01 | 100.0% | 16.8% |
| 5045688 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.54 | 43.0 | 2.73e-01 | 93.6% | 92.9% |
| 3353562 | 2002.1.1.104 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_2_C | 0.52 | 35.0 | 2.04e-01 | 70.2% | 12.8% |
| 3249369 | 388.1.1.7 ↗ | few secondary structure elements › Huristasin-like › Huristasin-like › Huristasin-like › FOLN | 0.52 | 32.0 | 3.15e-01 | 74.5% | 50.9% |
| 3769638 | 3223.1.1.1 ↗ | beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC | 0.52 | 39.0 | 2.32e-01 | 91.5% | 74.7% |