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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01099

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01099

Identity

Kingdom:
phage

Quality

83.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 118-189
PDB
Domain cluster: representative
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.92 86.0 5.79e-01 100.0% 43.9%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.91 76.0 7.82e-01 91.7% 92.6%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.88 75.0 5.99e-01 91.7% 51.9%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.88 77.0 7.17e-01 95.8% 77.0%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.87 79.0 5.67e-01 100.0% 49.2%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.87 78.0 6.87e-01 100.0% 69.0%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.84 73.0 7.13e-01 98.6% 87.0%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 69.0 6.13e-01 88.9% 62.7%
4gzrB00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.84 61.0 6.02e-01 100.0% 71.4%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.84 77.0 6.23e-01 100.0% 55.4%
1t7sA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.83 70.0 5.73e-01 91.7% 62.8%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.83 65.0 6.49e-01 84.7% 82.2%
1hciA03 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 66.0 5.55e-01 88.9% 54.2%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.81 72.0 6.13e-01 97.2% 69.6%
1wdzA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.81 72.0 5.03e-01 100.0% 32.0%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.81 73.0 6.33e-01 98.6% 70.8%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 62.0 5.51e-01 81.9% 60.4%
2gl2B00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 70.0 6.03e-01 100.0% 62.4%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.80 65.0 6.63e-01 88.9% 95.8%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.80 68.0 4.74e-01 100.0% 29.3%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.78 65.0 5.28e-01 93.1% 48.9%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 63.0 6.42e-01 86.1% 87.3%
3fb2A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 68.0 5.96e-01 95.8% 66.7%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.78 64.0 5.59e-01 88.9% 61.3%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.78 58.0 4.59e-01 94.4% 39.9%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.78 63.0 5.50e-01 91.7% 58.9%
3rklA00 6.10.140.1640 Special › Helix non-globular › Helix Hairpins › 0.77 53.0 5.10e-01 70.8% 71.2%
1b06A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.77 55.0 5.72e-01 98.6% 80.6%
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 54.0 5.22e-01 73.6% 95.1%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 66.0 6.45e-01 94.4% 87.2%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 63.0 5.53e-01 91.7% 60.9%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.77 61.0 6.30e-01 86.1% 92.5%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.77 60.0 6.35e-01 83.3% 100.0%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 53.0 5.91e-01 73.6% 100.0%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 63.0 6.23e-01 93.1% 84.4%
1fs0G02 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.75 59.0 5.57e-01 87.5% 100.0%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.75 65.0 5.77e-01 97.2% 76.7%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.74 62.0 5.55e-01 93.1% 65.7%
3pe0A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 64.0 5.60e-01 98.6% 64.2%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.74 60.0 6.18e-01 91.7% 95.6%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.73 58.0 5.74e-01 88.9% 81.6%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.73 61.0 6.09e-01 98.6% 90.5%
2fupA00 1.20.58.300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like 0.72 57.0 4.73e-01 87.5% 48.8%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.72 53.0 5.02e-01 80.6% 65.5%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.72 63.0 5.72e-01 100.0% 72.7%
1fpoC02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.72 53.0 4.98e-01 80.6% 68.1%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.72 58.0 5.85e-01 88.9% 93.0%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.72 58.0 5.63e-01 90.3% 80.0%
1vq8V00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 52.0 5.42e-01 76.4% 84.6%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 62.0 5.43e-01 100.0% 65.4%
2uuiA00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.71 53.0 4.15e-01 80.6% 38.1%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.70 61.0 5.48e-01 98.6% 73.5%
2p5tA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.70 58.0 5.30e-01 88.9% 69.6%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.70 61.0 5.83e-01 98.6% 91.8%
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.70 44.0 4.59e-01 79.2% 68.7%
3ay5A01 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.70 54.0 4.50e-01 88.9% 46.6%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.69 55.0 4.55e-01 91.7% 47.5%
3hwcA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.68 60.0 4.33e-01 100.0% 40.5%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.67 49.0 5.27e-01 100.0% 91.8%
3rrkA02 1.20.1460.20 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › 0.66 57.0 4.50e-01 97.2% 58.1%
2qffA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.66 46.0 4.56e-01 72.2% 70.3%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.65 56.0 5.57e-01 98.6% 93.2%
1ybzA00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.65 52.0 5.10e-01 84.7% 89.5%
2ipcA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.64 56.0 3.88e-01 97.2% 29.3%
1j1jA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.64 54.0 4.52e-01 97.2% 62.9%
2kg7B00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 55.0 5.06e-01 100.0% 75.3%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 50.0 4.82e-01 91.7% 88.0%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.62 51.0 5.01e-01 91.7% 87.2%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.62 49.0 4.83e-01 88.9% 89.7%
6qumQ00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.61 53.0 5.34e-01 98.6% 95.9%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.60 49.0 4.25e-01 88.9% 60.0%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3628093 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.92 83.0 7.21e-01 97.2% 66.7%
3827457 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.90 71.0 7.06e-01 98.6% 80.0%
1106555 3812.1.1.1 alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E 0.90 77.0 8.05e-01 91.7% 100.0%
3741801 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.89 79.0 6.41e-01 100.0% 54.4%
3715005 604.8.1.0 alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo 0.88 80.0 6.09e-01 100.0% 57.5%
3507551 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.88 71.0 6.40e-01 95.8% 65.3%
3285723 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.87 68.0 5.01e-01 94.4% 34.3%
1495253 150.5.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 0.87 78.0 6.87e-01 100.0% 69.0%
3286816 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.87 80.0 6.61e-01 100.0% 59.2%
3546060 4177.1.1.10 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH 0.86 80.0 5.15e-01 100.0% 31.2%
3291596 150.5.1.52 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE 0.86 78.0 6.90e-01 100.0% 70.0%
3284147 150.5.1.52 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE 0.86 79.0 6.79e-01 100.0% 66.7%
3839497 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.86 72.0 6.79e-01 95.8% 76.5%
3904566 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.86 79.0 5.55e-01 100.0% 38.0%
3336964 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.85 78.0 5.24e-01 100.0% 44.7%
3262220 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.85 77.0 5.05e-01 100.0% 32.9%
3337008 192.2.1.60 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF21A_4th 0.84 77.0 6.10e-01 100.0% 53.6%
3919843 604.1.1.124 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 0.84 76.0 6.19e-01 100.0% 55.4%
3484074 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.83 76.0 6.02e-01 100.0% 55.7%
3655688 3755.3.1.303 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.83 75.0 5.55e-01 98.6% 42.9%
3781506 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.83 75.0 5.79e-01 100.0% 51.6%
4586684 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.83 74.0 6.10e-01 100.0% 56.2%
3277932 150.5.1.52 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE 0.83 73.0 6.72e-01 95.8% 75.6%
3595103 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.83 65.0 5.25e-01 84.7% 48.1%
3375240 3755.3.1.575 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › BPS1 0.82 73.0 5.39e-01 98.6% 38.6%
3693258 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.82 71.0 6.17e-01 97.2% 62.7%
3780286 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.82 74.0 4.30e-01 100.0% 12.6%
3849660 11.2.1.25 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PL48 0.81 71.0 5.81e-01 97.2% 62.3%
3318812 192.8.1.248 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › KIF21A_4th 0.81 73.0 5.68e-01 100.0% 93.3%
3701046 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.81 67.0 6.07e-01 90.3% 67.4%
1879027 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.81 73.0 4.51e-01 100.0% 18.6%
3382610 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.81 72.0 4.83e-01 100.0% 26.7%
3770414 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.81 71.0 6.21e-01 95.8% 73.3%
4276314 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.81 72.0 5.03e-01 98.6% 53.2%
3350539 192.23.1.6 alpha bundles › Long alpha-hairpin › DUF683 › DUF683 › Med10 0.80 64.0 6.11e-01 97.2% 74.1%
3933048 4992.1.1.12 extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.80 70.0 6.26e-01 95.8% 77.0%
3641527 192.8.1.353 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med10 0.80 60.0 5.86e-01 80.6% 76.2%
3698292 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.80 71.0 5.65e-01 100.0% 63.4%
3947984 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.80 72.0 6.05e-01 100.0% 97.5%
4976784 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.80 66.0 5.71e-01 90.3% 60.0%
3181110 5086.1.1.110 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA 0.80 72.0 6.57e-01 100.0% 75.8%
3687766 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.79 69.0 4.79e-01 95.8% 70.7%
3368750 192.8.1.263 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF7615 0.79 69.0 6.17e-01 100.0% 68.6%
4606154 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.78 72.0 5.35e-01 100.0% 42.4%
4652719 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.78 65.0 5.89e-01 95.8% 68.4%
3565534 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.78 70.0 4.81e-01 100.0% 35.1%
3295251 605.1.1.185 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF7615 0.78 68.0 5.98e-01 100.0% 65.5%
3840952 601.19.1.39 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C 0.78 64.0 6.37e-01 88.9% 85.3%
4957621 4323.1.1.0 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.78 71.0 5.56e-01 100.0% 50.3%
4396574 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.77 62.0 4.69e-01 91.7% 37.8%
4819006 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.77 62.0 4.17e-01 91.7% 23.4%
3672993 150.5.1.6 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › DUF3082 0.77 64.0 5.46e-01 93.1% 57.4%
3349325 5086.1.1.135 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 0.77 61.0 5.98e-01 88.9% 80.0%
3389713 174.1.1.29 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 0.77 60.0 4.80e-01 84.7% 47.1%
3513888 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.77 69.0 5.33e-01 100.0% 56.1%
3535762 3187.1.1.2 alpha bundles › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein › DUF4795 0.76 67.0 4.83e-01 95.8% 50.3%
3579590 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.76 68.0 5.45e-01 100.0% 52.1%
3287947 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.76 68.0 6.30e-01 100.0% 82.2%
3927738 632.8.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.76 65.0 5.91e-01 97.2% 71.6%
4941675 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.76 67.0 3.98e-01 100.0% 14.2%
4474737 3711.1.1.44 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Med11 0.76 58.0 5.47e-01 100.0% 67.8%
4129922 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.75 65.0 5.86e-01 95.8% 71.0%
3782160 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.75 67.0 4.37e-01 100.0% 23.6%
4671 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.75 68.0 5.88e-01 100.0% 67.3%
3623190 174.1.1.31 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF7027 0.75 67.0 5.17e-01 100.0% 45.6%
3810801 632.22.1.139 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › KIF21A_4th 0.75 67.0 5.26e-01 100.0% 47.3%
4038778 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.75 62.0 5.36e-01 93.1% 70.4%
3477418 4992.1.1.12 extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.74 65.0 5.95e-01 97.2% 74.7%
3283060 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.74 65.0 6.26e-01 95.8% 87.5%
3754639 150.5.1.106 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C 0.74 66.0 6.23e-01 97.2% 82.4%
4156473 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.74 65.0 5.91e-01 97.2% 74.7%
4297833 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.74 66.0 6.14e-01 100.0% 80.0%
4966215 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 64.0 4.92e-01 100.0% 43.6%
3298752 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.72 62.0 5.26e-01 93.1% 60.0%
4562953 2004.1.1.43 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 0.72 62.0 4.18e-01 98.6% 26.0%
4003615 5054.1.1.59 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.71 61.0 4.36e-01 98.6% 32.9%
3611632 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.71 61.0 5.52e-01 98.6% 75.0%
4197529 4992.1.1.23 extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.70 62.0 5.37e-01 100.0% 64.5%
3361164 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.69 60.0 4.41e-01 100.0% 34.6%
5057549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 4.92e-01 97.2% 56.8%
3823703 212.1.1.22 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Topo-VIb_trans 0.63 53.0 3.78e-01 97.2% 38.3%
D2 medium residues 3-105
PDB
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 56.0 6.62e-01 84.5% 93.2%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 57.0 6.79e-01 87.4% 95.9%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 55.0 6.14e-01 84.5% 82.9%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 60.0 5.76e-01 93.2% 65.0%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 57.0 5.17e-01 82.5% 54.6%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 56.0 5.02e-01 82.5% 51.4%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 58.0 5.07e-01 80.6% 50.7%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 57.0 5.68e-01 83.5% 70.2%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 56.0 5.15e-01 80.6% 55.8%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 58.0 5.70e-01 95.1% 69.4%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 62.0 6.42e-01 100.0% 83.7%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 56.0 5.91e-01 83.5% 77.7%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 54.0 5.67e-01 85.4% 74.5%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 4.95e-01 81.6% 50.7%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 5.15e-01 82.5% 55.2%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 53.0 6.34e-01 78.6% 97.2%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 53.0 6.31e-01 83.5% 97.2%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 55.0 5.00e-01 82.5% 54.1%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 56.0 5.91e-01 91.3% 79.6%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 56.0 5.75e-01 83.5% 74.7%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 54.0 4.89e-01 84.5% 52.6%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 5.34e-01 81.6% 59.1%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 4.98e-01 82.5% 51.0%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 5.00e-01 79.6% 53.6%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 5.95e-01 82.5% 80.6%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 6.05e-01 100.0% 77.9%
3f6oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 55.0 5.85e-01 94.2% 81.3%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 5.21e-01 81.6% 58.3%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 5.12e-01 80.6% 56.6%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 5.28e-01 81.6% 61.1%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 55.0 4.93e-01 82.5% 53.6%
1r1tA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 5.48e-01 82.5% 73.5%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 6.37e-01 82.5% 92.9%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.85e-01 82.5% 50.3%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.90e-01 82.5% 51.0%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 5.66e-01 79.6% 78.5%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.78 48.0 5.04e-01 84.5% 68.8%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 5.09e-01 82.5% 55.6%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 4.94e-01 82.5% 54.2%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 4.95e-01 82.5% 58.1%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.88e-01 100.0% 72.5%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 4.69e-01 81.6% 46.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 5.04e-01 82.5% 56.9%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 5.00e-01 81.6% 55.7%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 57.0 6.42e-01 82.5% 98.8%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 57.0 5.10e-01 82.5% 58.1%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 5.02e-01 82.5% 57.2%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 5.61e-01 95.1% 82.0%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 5.96e-01 98.1% 92.7%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 50.0 4.52e-01 81.6% 51.5%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.19e-01 83.5% 88.0%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 5.97e-01 82.5% 88.8%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 4.82e-01 80.6% 54.2%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 4.87e-01 85.4% 55.3%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 6.04e-01 85.4% 92.9%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 5.99e-01 82.5% 90.8%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 5.95e-01 81.6% 88.9%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 50.0 5.86e-01 84.5% 97.3%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.52e-01 83.5% 91.2%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.59e-01 82.5% 78.2%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 56.0 5.11e-01 95.1% 61.4%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.62e-01 83.5% 98.3%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 53.0 5.84e-01 80.6% 91.7%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.00e-01 82.5% 73.3%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.59e-01 83.5% 88.2%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 55.0 5.63e-01 81.6% 81.0%
4chuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.72e-01 91.3% 92.9%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 5.67e-01 81.6% 90.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 4.72e-01 81.6% 57.4%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.76e-01 88.3% 100.0%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4993580 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.91 56.0 7.19e-01 71.8% 100.0%
5080102 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.90 55.0 6.96e-01 84.5% 98.5%
4969689 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.89 55.0 6.98e-01 80.6% 100.0%
5028073 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.88 59.0 5.93e-01 97.1% 67.6%
5062268 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.88 55.0 6.82e-01 85.4% 97.1%
4945656 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 60.0 5.06e-01 90.3% 45.6%
4982752 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.86 54.0 5.56e-01 85.4% 66.0%
4993982 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.85 54.0 5.66e-01 84.5% 70.2%
4950235 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 57.0 5.42e-01 84.5% 59.2%
4940859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 60.0 6.44e-01 72.8% 83.3%
4998022 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.85 58.0 6.42e-01 83.5% 85.7%
4944865 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.85 58.0 5.84e-01 88.3% 69.5%
4981509 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 54.0 6.55e-01 86.4% 95.7%
5080737 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 55.0 6.48e-01 82.5% 92.0%
5067395 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.84 58.0 6.60e-01 77.7% 91.3%
4927447 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.84 59.0 6.91e-01 91.3% 98.7%
5039585 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.84 57.0 6.17e-01 83.5% 80.0%
5029837 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 63.0 6.90e-01 82.5% 92.9%
5006816 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.84 57.0 6.48e-01 82.5% 90.0%
3603007 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.83 55.0 6.39e-01 83.5% 92.0%
5040674 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.83 56.0 6.21e-01 84.5% 83.5%
4967668 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.83 56.0 6.34e-01 85.4% 88.7%
5079818 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 61.0 6.55e-01 82.5% 86.7%
5042497 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.83 60.0 6.29e-01 74.8% 95.8%
5039413 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 58.0 5.39e-01 85.4% 59.2%
5058358 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.83 60.0 6.61e-01 82.5% 90.6%
5075217 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.82 60.0 5.86e-01 100.0% 70.0%
4532474 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.82 53.0 6.47e-01 86.4% 98.6%
5050717 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.82 61.0 6.06e-01 100.0% 74.3%
4994131 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 58.0 5.69e-01 82.5% 68.2%
3963899 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.82 56.0 6.17e-01 83.5% 84.7%
4989093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 57.0 6.70e-01 81.6% 100.0%
5064092 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.82 61.0 5.97e-01 83.5% 71.8%
4999099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 59.0 5.91e-01 82.5% 73.8%
4974684 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 57.0 5.85e-01 81.6% 74.0%
5081614 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 61.0 6.67e-01 82.5% 92.9%
4970077 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 57.0 6.44e-01 99.0% 92.5%
4951675 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.81 61.0 6.23e-01 80.6% 80.0%
4966804 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.81 56.0 6.16e-01 81.6% 85.9%
4960070 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 59.0 6.28e-01 82.5% 85.6%
5047052 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.81 57.0 4.71e-01 86.4% 44.0%
4096141 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.81 59.0 6.27e-01 100.0% 85.6%
5058068 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.81 56.0 5.98e-01 82.5% 81.1%
5061230 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 57.0 6.22e-01 85.4% 87.1%
5066482 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.80 56.0 6.04e-01 82.5% 82.2%
5054801 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.80 60.0 6.40e-01 82.5% 87.8%
4956538 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 56.0 6.51e-01 95.1% 98.7%
4991339 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 57.0 5.12e-01 85.4% 55.6%
3943162 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.80 57.0 5.56e-01 80.6% 68.2%
4937866 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 56.0 6.16e-01 81.6% 88.2%
4932911 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.79 56.0 5.80e-01 91.3% 77.9%
4992529 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 58.0 6.20e-01 81.6% 86.7%
4951748 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 57.0 6.07e-01 85.4% 84.4%
4988740 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.79 56.0 5.89e-01 82.5% 80.0%
4949735 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.78 53.0 5.79e-01 80.6% 83.5%
4985160 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 57.0 5.69e-01 82.5% 73.3%
4961811 101.1.2.924 alpha arrays › HTH › HTH › winged helix domain › DUF7342 0.78 55.0 6.08e-01 89.3% 88.2%
5040398 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.78 59.0 6.19e-01 99.0% 85.3%
5060165 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 52.0 6.02e-01 84.5% 93.3%
5069901 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 55.0 5.93e-01 81.6% 84.4%
5007348 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 4.93e-01 81.6% 52.0%
4679149 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 5.94e-01 82.5% 82.1%
4940407 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 55.0 5.87e-01 82.5% 83.3%
5057033 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.77 56.0 5.83e-01 82.5% 81.1%
4527065 101.1.2.32 alpha arrays › HTH › HTH › winged helix domain › Rrf2 0.77 62.0 5.44e-01 84.5% 84.1%
5044385 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.76 61.0 4.72e-01 83.5% 94.8%
4959083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 54.0 4.51e-01 82.5% 44.1%
4120593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 5.27e-01 83.5% 81.3%
4994269 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.75 54.0 5.95e-01 85.4% 89.4%
4068633 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 59.0 5.77e-01 83.5% 92.7%
5020024 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.72 57.0 5.55e-01 84.5% 76.4%
4938126 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.29e-01 91.3% 96.7%
5015941 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.70 53.0 5.11e-01 95.1% 70.4%
4977284 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.67 62.0 5.52e-01 99.0% 82.1%
5041367 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.65 58.0 4.17e-01 94.2% 63.3%
4942472 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 54.0 5.11e-01 99.0% 77.5%
4962699 101.1.2.924 alpha arrays › HTH › HTH › winged helix domain › DUF7342 0.61 55.0 4.64e-01 96.1% 93.9%