Back to structures

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01104

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01104

Identity

Kingdom:
phage

Quality

82.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-170
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01584.25 best CheW 40.4 3.00e-10 86.1% 97.8%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jpbW02 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.85 42.0 6.05e-01 75.9% 98.7%
4jpbW01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 32.0 5.29e-01 81.6% 98.4%
1b3qB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 34.0 5.30e-01 84.2% 95.6%
2qdlA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 32.0 5.27e-01 81.0% 100.0%
2qdlA02 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.76 39.0 5.35e-01 74.7% 95.2%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.58 27.0 3.67e-01 73.4% 85.7%
2kjzA01 3.30.720.120 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.52 19.0 3.15e-01 77.8% 96.3%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 24.0 3.01e-01 95.6% 68.8%
2kjzA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 20.0 3.22e-01 81.0% 100.0%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5020410 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.88 73.0 7.67e-01 85.4% 95.2%
4662872 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.88 73.0 7.92e-01 87.3% 100.0%
4950861 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.88 75.0 7.65e-01 88.6% 98.1%
4145388 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.88 74.0 7.89e-01 87.3% 100.0%
3968071 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.87 73.0 7.81e-01 86.7% 98.6%
4928713 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.87 72.0 7.58e-01 85.4% 98.6%
5050253 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.87 75.0 7.70e-01 88.6% 98.0%
4994835 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.87 72.0 7.77e-01 87.3% 100.0%
3971152 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.86 74.0 7.72e-01 88.6% 97.9%
4319178 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.86 73.0 7.72e-01 88.0% 98.6%
5016331 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.86 72.0 7.68e-01 86.7% 100.0%
4995619 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.86 72.0 7.69e-01 88.6% 98.6%
3976157 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.86 72.0 7.53e-01 86.7% 100.0%
4240075 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.85 73.0 7.76e-01 88.6% 100.0%
4661427 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.85 73.0 7.60e-01 88.6% 98.6%
4931741 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.85 72.0 7.43e-01 88.0% 99.3%
4964711 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.85 70.0 7.55e-01 84.8% 99.3%
5038807 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.85 70.0 7.41e-01 88.6% 96.4%
5038808 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.84 69.0 7.48e-01 88.0% 100.0%
4204475 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.84 72.0 7.43e-01 88.6% 97.3%
4988726 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.84 71.0 7.28e-01 88.0% 92.0%
3967460 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.84 72.0 7.39e-01 88.6% 98.0%
3387448 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.84 72.0 7.53e-01 88.6% 99.3%
5048652 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.84 68.0 7.19e-01 88.0% 93.6%
3968615 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.84 77.0 7.72e-01 96.2% 95.0%
4949051 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.84 68.0 7.43e-01 84.8% 100.0%
3839271 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.83 71.0 7.22e-01 88.6% 98.1%
4988734 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.83 61.0 7.00e-01 83.5% 100.0%
3839187 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.83 71.0 6.94e-01 88.6% 93.5%
4930200 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.83 66.0 7.30e-01 88.6% 100.0%
3967712 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.83 70.0 7.32e-01 87.3% 100.0%
4949981 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.82 63.0 7.07e-01 84.8% 100.0%
3967327 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.82 69.0 7.19e-01 88.0% 98.6%
4482101 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.81 67.0 7.24e-01 88.0% 100.0%
5007113 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.81 64.0 7.09e-01 85.4% 99.2%
1178512 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.81 65.0 7.09e-01 88.6% 99.2%
4302514 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.81 65.0 7.12e-01 85.4% 100.0%
5020421 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.81 64.0 7.09e-01 84.8% 100.0%
3967325 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.81 70.0 7.21e-01 89.9% 96.0%
4385582 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.81 66.0 7.16e-01 88.6% 100.0%
3968991 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.80 70.0 7.27e-01 90.5% 97.9%
3969587 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.80 67.0 6.98e-01 88.0% 93.8%
4377808 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.80 63.0 6.87e-01 84.8% 97.0%
5041484 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.80 66.0 7.11e-01 88.0% 100.0%
4479028 2.10.1.0 beta barrels › OB-fold › CheW › CheW 0.80 55.0 6.48e-01 87.3% 100.0%
3838306 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.79 67.0 7.00e-01 89.9% 95.9%
5051640 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.79 67.0 6.99e-01 88.0% 95.9%
164917 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.79 67.0 6.61e-01 89.2% 86.8%
3970756 2.10.1.0 beta barrels › OB-fold › CheW › CheW 0.79 67.0 6.59e-01 88.0% 89.7%
4964707 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.79 63.0 6.79e-01 87.3% 97.0%
4949046 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.78 66.0 6.99e-01 88.6% 100.0%
4927009 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.77 62.0 6.60e-01 83.5% 100.0%
5016330 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.75 29.0 4.86e-01 84.8% 98.3%
3025579 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 24.0 3.70e-01 82.3% 83.3%
4088295 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 31.0 4.11e-01 70.3% 97.5%
4443438 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.52 33.0 3.78e-01 70.3% 87.8%
4297076 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.51 33.0 3.60e-01 78.5% 78.4%
4439090 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.51 32.0 3.48e-01 78.5% 73.8%
3252283 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 34.0 3.73e-01 97.5% 82.4%