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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01172
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01172
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-161
Domain cluster:
rep: IMGVR_UViG_3300025458_000424-3300025458-Ga0209559_100090112__D25-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00565.24 best | SNase | 62.8 | 5.40e-17 | 74.8% | 99.1% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bdlA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.84 | 73.0 | 7.01e-01 | 89.2% | 88.3% |
| 1a2tA00 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.84 | 73.0 | 7.49e-01 | 89.9% | 100.0% |
| 4qmgC01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.84 | 74.0 | 7.05e-01 | 92.1% | 91.2% |
| 4qmgA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.83 | 73.0 | 7.24e-01 | 91.4% | 92.4% |
| 3bdlA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.82 | 73.0 | 6.77e-01 | 92.1% | 96.4% |
| 2wacA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 69.0 | 7.25e-01 | 91.4% | 100.0% |
| 4b9wA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 56.0 | 6.31e-01 | 75.5% | 92.6% |
| 3bdlA03 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 63.0 | 6.62e-01 | 82.0% | 92.8% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.52 | 23.0 | 2.89e-01 | 79.1% | 67.1% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4510334 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.96 | 83.0 | 8.76e-01 | 87.8% | 100.0% |
| 3385491 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.91 | 85.0 | 7.98e-01 | 97.1% | 83.1% |
| 4180654 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.90 | 85.0 | 8.42e-01 | 97.1% | 99.3% |
| 3807059 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.89 | 80.0 | 7.09e-01 | 92.1% | 100.0% |
| 3949229 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.89 | 83.0 | 8.15e-01 | 95.7% | 100.0% |
| 3965688 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 80.0 | 8.16e-01 | 92.8% | 100.0% |
| 4673831 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 81.0 | 7.48e-01 | 95.0% | 94.1% |
| 4525451 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 84.0 | 6.98e-01 | 98.6% | 82.7% |
| 4261758 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 83.0 | 7.85e-01 | 98.6% | 98.1% |
| 3730357 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 77.0 | 7.70e-01 | 90.6% | 100.0% |
| 4218429 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 83.0 | 7.12e-01 | 99.3% | 91.7% |
| 3972842 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 75.0 | 7.76e-01 | 88.5% | 100.0% |
| 4022903 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 76.0 | 7.17e-01 | 90.6% | 85.0% |
| 3634014 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.86 | 74.0 | 7.47e-01 | 89.2% | 100.0% |
| 3930254 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 76.0 | 7.29e-01 | 91.4% | 95.5% |
| 4026268 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 75.0 | 6.89e-01 | 89.9% | 85.9% |
| 3392076 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 76.0 | 7.10e-01 | 91.4% | 86.7% |
| 3261195 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 76.0 | 7.15e-01 | 91.4% | 93.8% |
| 3611847 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 73.0 | 6.85e-01 | 88.5% | 77.0% |
| 3738104 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 74.0 | 6.89e-01 | 89.2% | 89.1% |
| 5069938 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 63.0 | 7.28e-01 | 78.4% | 100.0% |
| 3609631 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 75.0 | 7.27e-01 | 90.6% | 97.3% |
| 4026270 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 76.0 | 7.06e-01 | 92.1% | 96.4% |
| 3366163 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 74.0 | 7.00e-01 | 89.9% | 91.3% |
| 3785402 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 75.0 | 7.12e-01 | 92.1% | 94.4% |
| 152457 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 76.0 | 7.40e-01 | 92.8% | 93.3% |
| 3337007 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 75.0 | 6.64e-01 | 92.1% | 84.7% |
| 3599041 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.85 | 74.0 | 7.27e-01 | 89.9% | 100.0% |
| 5054098 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 73.0 | 7.73e-01 | 89.2% | 100.0% |
| 1833415 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 62.0 | 7.16e-01 | 77.0% | 100.0% |
| 3971135 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 72.0 | 7.38e-01 | 88.5% | 100.0% |
| 3713169 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 79.0 | 7.14e-01 | 97.8% | 83.9% |
| 3743204 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 73.0 | 7.01e-01 | 89.9% | 87.1% |
| 4033114 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 72.0 | 7.49e-01 | 88.5% | 100.0% |
| 3194464 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 73.0 | 6.85e-01 | 90.6% | 88.5% |
| 3558931 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 75.0 | 7.08e-01 | 92.8% | 96.2% |
| 3642215 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 74.0 | 6.90e-01 | 91.4% | 78.2% |
| 4534120 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 79.0 | 6.63e-01 | 98.6% | 81.4% |
| 3609625 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 80.0 | 7.17e-01 | 99.3% | 85.6% |
| 3276512 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 73.0 | 7.58e-01 | 91.4% | 96.9% |
| 3485853 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 77.0 | 6.93e-01 | 95.7% | 83.9% |
| 3596658 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.83 | 79.0 | 7.24e-01 | 99.3% | 87.4% |
| 3514893 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 73.0 | 6.86e-01 | 91.4% | 84.8% |
| 3261189 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 74.0 | 6.90e-01 | 92.1% | 80.0% |
| 4030587 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 72.0 | 6.73e-01 | 89.9% | 84.8% |
| 3582420 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 73.0 | 6.75e-01 | 91.4% | 80.6% |
| 3791070 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 74.0 | 6.76e-01 | 92.8% | 91.4% |
| 4026269 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 72.0 | 7.27e-01 | 90.6% | 100.0% |
| 4928964 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 65.0 | 7.22e-01 | 81.3% | 100.0% |
| 4589357 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 79.0 | 7.50e-01 | 100.0% | 92.5% |
| 3277340 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 72.0 | 6.86e-01 | 91.4% | 88.1% |
| 3649895 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 50.0 | 6.34e-01 | 70.5% | 100.0% |
| 3785399 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 72.0 | 7.01e-01 | 91.4% | 93.3% |
| 3785401 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 72.0 | 6.82e-01 | 91.4% | 83.1% |
| 3894374 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.81 | 69.0 | 7.18e-01 | 88.5% | 94.6% |
| 3609624 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.81 | 71.0 | 6.99e-01 | 91.4% | 91.0% |
| 4966291 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.80 | 62.0 | 6.60e-01 | 79.9% | 94.4% |
| 3397365 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.80 | 57.0 | 6.27e-01 | 75.5% | 87.8% |
| 4968397 | 2.6.1.8 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › N6_N4_Mtase | 0.80 | 62.0 | 4.23e-01 | 79.9% | 27.3% |
| 3881118 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.80 | 51.0 | 6.29e-01 | 87.8% | 100.0% |
| 3718333 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.79 | 68.0 | 6.86e-01 | 89.9% | 95.7% |
| 3596660 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.79 | 69.0 | 7.06e-01 | 91.4% | 98.5% |
| 3411297 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.79 | 57.0 | 6.57e-01 | 80.6% | 98.1% |
| 3797164 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.79 | 56.0 | 6.19e-01 | 93.5% | 87.8% |
| 3596659 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.79 | 69.0 | 6.53e-01 | 91.4% | 83.1% |
| 3844246 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.78 | 58.0 | 6.36e-01 | 77.0% | 91.3% |
| 3564425 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.78 | 53.0 | 5.95e-01 | 91.4% | 87.3% |
| 3785400 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.78 | 68.0 | 6.95e-01 | 90.6% | 95.6% |
| 3504269 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.78 | 56.0 | 6.29e-01 | 73.4% | 93.6% |
| 3201480 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.78 | 71.0 | 7.04e-01 | 95.7% | 97.2% |
| 3995180 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.77 | 68.0 | 5.84e-01 | 91.4% | 75.6% |
| 3776626 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.77 | 73.0 | 7.15e-01 | 100.0% | 95.3% |
| 3879038 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.76 | 52.0 | 5.87e-01 | 90.6% | 88.2% |
| 3577387 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.76 | 54.0 | 5.98e-01 | 73.4% | 99.1% |
| 3856429 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.75 | 56.0 | 6.07e-01 | 79.9% | 89.2% |
| 3485871 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.75 | 65.0 | 6.49e-01 | 89.2% | 96.4% |
| 3576127 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.75 | 47.0 | 5.70e-01 | 86.3% | 96.7% |
| 3619812 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.74 | 49.0 | 4.22e-01 | 89.2% | 44.3% |
| 3230056 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.74 | 50.0 | 5.66e-01 | 92.1% | 89.5% |
| 3562148 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.74 | 56.0 | 6.00e-01 | 78.4% | 90.0% |
| 3410967 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.73 | 48.0 | 5.75e-01 | 84.9% | 97.9% |
| 3565765 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.73 | 60.0 | 5.99e-01 | 98.6% | 83.6% |
| 3218323 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.73 | 54.0 | 5.61e-01 | 76.3% | 92.3% |
| 4663095 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.72 | 53.0 | 5.71e-01 | 76.3% | 88.2% |
| 3410543 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.71 | 52.0 | 5.27e-01 | 75.5% | 84.3% |
| 3409459 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.70 | 52.0 | 5.77e-01 | 97.8% | 96.4% |
| 4075688 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.70 | 56.0 | 4.57e-01 | 84.2% | 47.3% |
| 3573643 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.69 | 48.0 | 5.19e-01 | 89.2% | 82.5% |
| 3579004 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.69 | 51.0 | 5.37e-01 | 76.3% | 96.8% |
| 3628656 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.69 | 49.0 | 5.34e-01 | 73.4% | 94.8% |