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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01215

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01215

Identity

Kingdom:
phage

Quality

58.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-114
PDB
D2 medium residues 115-235
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cecB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.60 42.0 3.53e-01 90.1% 44.0%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.58 41.0 4.44e-01 74.4% 91.0%
2r5sA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 33.0 3.89e-01 81.0% 81.9%
2bb5A01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.54 45.0 3.51e-01 95.9% 72.5%
1e3mB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.51 33.0 3.07e-01 78.5% 50.7%
1k1aA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.50 42.0 3.43e-01 96.7% 47.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5008560 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.63 42.0 4.47e-01 76.0% 77.1%
3217001 109.12.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › MAS20 0.52 34.0 3.89e-01 91.7% 94.1%
D3 medium residues 345-395
PDB
D4 medium residues 396-451
PDB