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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01217
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01217
Identity
- Kingdom:
- phage
Quality
59.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 50-153
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6idxA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.66 | 60.0 | 4.69e-01 | 100.0% | 58.0% |
| 1h2tC03 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 59.0 | 4.54e-01 | 100.0% | 57.0% |
| 4eadA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.65 | 55.0 | 5.50e-01 | 92.3% | 99.1% |
| 3dadA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.65 | 57.0 | 4.07e-01 | 99.0% | 46.6% |
| 4rv1F00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 57.0 | 3.84e-01 | 100.0% | 29.0% |
| 5dllA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.64 | 56.0 | 4.04e-01 | 100.0% | 37.4% |
| 1e8yA03 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.64 | 56.0 | 4.65e-01 | 98.1% | 56.5% |
| 2f07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 53.0 | 4.32e-01 | 92.3% | 78.6% |
| 1bwoA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.63 | 46.0 | 4.85e-01 | 76.0% | 97.8% |
| 3b34A05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.62 | 54.0 | 3.87e-01 | 98.1% | 34.8% |
| 1mivA02 | 1.10.110.30 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › | 0.62 | 46.0 | 4.76e-01 | 85.6% | 85.4% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.62 | 55.0 | 4.64e-01 | 100.0% | 93.3% |
| 3himA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 51.0 | 4.27e-01 | 92.3% | 83.2% |
| 7miqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 45.0 | 4.46e-01 | 77.9% | 96.4% |
| 4f0cA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 44.0 | 4.03e-01 | 76.0% | 89.1% |
| 4x4wA02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.60 | 49.0 | 4.04e-01 | 90.4% | 66.7% |
| 4ikhA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 44.0 | 4.14e-01 | 76.9% | 81.1% |
| 3feyA02 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 52.0 | 4.33e-01 | 99.0% | 71.4% |
| 3pasA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 47.0 | 3.93e-01 | 87.5% | 80.0% |
| 3lszA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 43.0 | 4.10e-01 | 78.8% | 88.0% |
| 6tkyA03 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.58 | 44.0 | 4.19e-01 | 80.8% | 91.0% |
| 4fjqA02 | 1.50.10.130 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain | 0.58 | 41.0 | 3.63e-01 | 75.0% | 63.0% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.58 | 51.0 | 4.52e-01 | 100.0% | 77.3% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.57 | 43.0 | 4.39e-01 | 86.5% | 83.2% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 40.0 | 3.64e-01 | 74.0% | 71.8% |
| 3c02A00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.56 | 40.0 | 3.12e-01 | 75.0% | 78.1% |
| 1hxiA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 42.0 | 4.18e-01 | 100.0% | 80.4% |
| 4n5cD06 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 47.0 | 4.58e-01 | 100.0% | 90.3% |
| 3qwwA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 43.0 | 3.59e-01 | 91.3% | 51.8% |
| 5jj6B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 40.0 | 4.17e-01 | 93.3% | 90.6% |
| 6m4eA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 44.0 | 2.86e-01 | 98.1% | 62.8% |
| 1qx1A01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.51 | 45.0 | 3.11e-01 | 99.0% | 36.5% |
| 1w3bB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 44.0 | 3.12e-01 | 100.0% | 34.8% |
| 1nigA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.51 | 36.0 | 3.30e-01 | 74.0% | 67.1% |
| 2pl2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 44.0 | 3.68e-01 | 100.0% | 56.7% |
| 2ijqA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.50 | 38.0 | 3.44e-01 | 79.8% | 73.1% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3268903 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 59.0 | 4.37e-01 | 100.0% | 43.2% |
| 3666430 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 58.0 | 3.74e-01 | 98.1% | 26.2% |
| 3910262 | 109.4.1.159 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ELMO_ARM | 0.66 | 59.0 | 4.41e-01 | 100.0% | 46.5% |
| 3825589 | 109.4.1.79 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Bystin | 0.65 | 58.0 | 4.12e-01 | 99.0% | 37.8% |
| 3734818 | 109.4.1.147 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind | 0.65 | 53.0 | 3.42e-01 | 91.3% | 25.7% |
| 3862883 | 109.3.1.92 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › ZSWIM4-8_C | 0.64 | 58.0 | 4.75e-01 | 100.0% | 61.1% |
| 3662136 | 109.4.1.903 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_28 | 0.64 | 55.0 | 3.96e-01 | 97.1% | 48.0% |
| 3695311 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.63 | 56.0 | 4.37e-01 | 100.0% | 65.1% |
| 3457808 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 55.0 | 5.04e-01 | 100.0% | 73.6% |
| 3844760 | 109.4.1.917 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TT21_N | 0.62 | 55.0 | 3.94e-01 | 100.0% | 41.8% |
| 3900047 | 109.25.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN | 0.62 | 51.0 | 4.72e-01 | 90.4% | 97.8% |
| 3640024 | 109.4.1.630 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_TTP_bind,CNOT1_HEAT | 0.62 | 55.0 | 3.45e-01 | 100.0% | 25.3% |
| 3935605 | 109.4.1.226 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_TTP_bind | 0.62 | 55.0 | 4.57e-01 | 100.0% | 89.7% |
| 3188275 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.61 | 45.0 | 3.80e-01 | 77.9% | 91.1% |
| 3723576 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.60 | 50.0 | 3.24e-01 | 89.4% | 89.2% |
| 3191245 | 603.1.1.69 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF6987 | 0.60 | 44.0 | 3.73e-01 | 76.9% | 72.0% |
| 3188628 | 109.4.1.630 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_TTP_bind,CNOT1_HEAT | 0.59 | 50.0 | 3.23e-01 | 97.1% | 28.3% |
| 4288814 | 109.4.1.127 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G_like | 0.59 | 51.0 | 4.21e-01 | 100.0% | 63.9% |
| 4561977 | 1065.1.1.1 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › SPX | 0.59 | 42.0 | 3.35e-01 | 76.0% | 80.4% |
| 3632105 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 4.48e-01 | 100.0% | 77.6% |
| 3921091 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.57 | 45.0 | 4.03e-01 | 83.7% | 90.3% |
| 4187493 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.57 | 43.0 | 3.96e-01 | 81.7% | 89.0% |
| 3623906 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.56 | 43.0 | 3.99e-01 | 81.7% | 90.4% |
| 3441717 | 604.1.1.146 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4220 | 0.56 | 41.0 | 3.61e-01 | 76.0% | 72.3% |
| 3688535 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 46.0 | 3.24e-01 | 100.0% | 47.8% |
| 3219705 | 5001.1.1.16 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srt | 0.50 | 44.0 | 3.21e-01 | 99.0% | 81.3% |
D2
medium
residues 154-231
D3
medium
residues 232-289