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S2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00106
Bact-VirS2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00106
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-60
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7tj9A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.82 | 63.0 | 4.94e-01 | 100.0% | 41.5% |
| 5tprA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.70 | 58.0 | 3.81e-01 | 100.0% | 22.7% |
| 1uqtA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.68 | 53.0 | 3.48e-01 | 87.0% | 20.6% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.67 | 57.0 | 5.03e-01 | 96.3% | 64.9% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.64 | 57.0 | 3.88e-01 | 100.0% | 27.7% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 51.0 | 3.55e-01 | 98.1% | 24.0% |
| 4griA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.57 | 35.0 | 3.56e-01 | 74.1% | 62.3% |
| 2d05A02 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.51 | 35.0 | 2.98e-01 | 77.8% | 65.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3872946 | 601.19.1.55 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › PF28139 | 0.85 | 66.0 | 3.80e-01 | 100.0% | 10.6% |
| 5074150 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.84 | 64.0 | 6.37e-01 | 100.0% | 78.2% |
| 4075864 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.81 | 58.0 | 5.78e-01 | 98.1% | 72.7% |
| 4442773 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 55.0 | 3.22e-01 | 100.0% | 39.8% |
| 3962012 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 59.0 | 4.89e-01 | 100.0% | 88.4% |
| 5030376 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.64 | 55.0 | 3.68e-01 | 98.1% | 76.6% |
| 3619607 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 48.0 | 4.28e-01 | 90.7% | 56.2% |
| 3934503 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.54 | 42.0 | 4.38e-01 | 87.0% | 90.0% |