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S2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00301
Bact-VirS2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00301
Identity
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-82
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.82 | 67.0 | 4.27e-01 | 86.3% | 20.3% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 57.0 | 5.52e-01 | 80.8% | 69.1% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.69 | 52.0 | 3.28e-01 | 82.2% | 16.6% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 58.0 | 5.21e-01 | 98.6% | 71.0% |
| 2qkwA00 | 1.20.1270.140 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AvrPto | 0.55 | 40.0 | 3.68e-01 | 78.1% | 97.0% |
| 1uxtA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 36.0 | 2.52e-01 | 74.0% | 44.0% |
| 1q2lA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 36.0 | 2.63e-01 | 76.7% | 29.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3663497 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 59.0 | 4.50e-01 | 75.3% | 40.0% |
| 3755943 | 223.2.1.37 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like | 0.77 | 48.0 | 3.54e-01 | 74.0% | 24.9% |
| 3400862 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.76 | 58.0 | 4.39e-01 | 80.8% | 35.9% |
| 3502623 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.70 | 61.0 | 4.03e-01 | 93.2% | 62.9% |
| 3754607 | 605.1.1.108 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE | 0.68 | 52.0 | 4.64e-01 | 83.6% | 67.6% |