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S2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00337
Bact-VirS2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00337
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-181
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4750547_curated_closed_complete_prodigal-single.1__X__X__00227__D81-193
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.63 | 44.0 | 4.64e-01 | 80.4% | 81.2% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 47.0 | 4.01e-01 | 88.4% | 52.1% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.56 | 45.0 | 3.61e-01 | 88.4% | 46.8% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.16e-01 | 100.0% | 57.0% |
| 7pthC01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.52 | 40.0 | 2.71e-01 | 83.9% | 55.2% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.50 | 36.0 | 3.95e-01 | 97.3% | 93.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3537588 | 331.17.1.1 ↗ | a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 | 0.64 | 44.0 | 3.82e-01 | 71.4% | 54.9% |
| 3648040 | 331.17.1.1 ↗ | a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 | 0.60 | 42.0 | 3.67e-01 | 71.4% | 59.4% |
| 4028672 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.59 | 48.0 | 3.81e-01 | 86.6% | 80.4% |
| 3175626 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.59 | 28.0 | 3.34e-01 | 73.2% | 65.3% |
| 5028275 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.58 | 47.0 | 3.36e-01 | 89.3% | 38.0% |
| 3878211 | 881.1.1.22 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Rab3-GAP_cat_C | 0.55 | 44.0 | 3.40e-01 | 88.4% | 85.1% |
| 4030216 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.48e-01 | 100.0% | 67.9% |
| 3589333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 34.0 | 3.71e-01 | 91.1% | 76.8% |
| 5012328 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.53 | 37.0 | 3.12e-01 | 73.2% | 51.8% |
| 4991451 | 213.1.1.17 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1122 | 0.52 | 38.0 | 3.58e-01 | 75.9% | 80.0% |
| 3871885 | 2496.1.1.6 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO_2 | 0.51 | 39.0 | 3.34e-01 | 80.4% | 60.5% |
| 3713007 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.50 | 39.0 | 2.73e-01 | 83.9% | 40.2% |
| None | — | 0.50 | 40.0 | 2.75e-01 | 83.9% | 41.3% | |
| 3477257 | 5.1.4.148 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR93 | 0.50 | 39.0 | 2.57e-01 | 83.9% | 38.5% |
| 3210981 | 5.1.5.73 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N | 0.50 | 43.0 | 3.09e-01 | 95.5% | 72.5% |
D2
medium
residues 12-69
Domain cluster:
representative