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S2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00390
Bact-VirS2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00390
Identity
- Kingdom:
- phage
Quality
76.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-110
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hd3K00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.63 | 43.0 | 4.20e-01 | 70.1% | 87.2% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 40.0 | 3.58e-01 | 73.6% | 47.6% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 40.0 | 4.11e-01 | 71.3% | 100.0% |
| 1ocsA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 39.0 | 3.37e-01 | 70.1% | 77.3% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 39.0 | 3.50e-01 | 71.3% | 78.9% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 4.47e-01 | 93.1% | 98.5% |
| 2bi0A02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 42.0 | 3.62e-01 | 83.9% | 82.3% |
| 5aj3E01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.55 | 42.0 | 4.38e-01 | 94.3% | 90.1% |
| 3nv0B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.70e-01 | 86.2% | 82.4% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.53 | 38.0 | 3.28e-01 | 77.0% | 66.9% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 43.0 | 4.05e-01 | 88.5% | 86.9% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 30.0 | 3.50e-01 | 82.8% | 85.7% |
| 2gtlM02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 46.0 | 3.75e-01 | 100.0% | 72.3% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 29.0 | 3.26e-01 | 77.0% | 75.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3791028 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.65 | 44.0 | 3.92e-01 | 70.1% | 76.8% |
| 4050042 | 4.1.1.441 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26332 | 0.65 | 50.0 | 5.22e-01 | 100.0% | 91.3% |
| 4003463 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.63 | 52.0 | 4.62e-01 | 89.7% | 79.2% |
| 3621723 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.63 | 51.0 | 3.74e-01 | 89.7% | 40.4% |
| 3785535 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.63 | 47.0 | 4.08e-01 | 78.2% | 80.8% |
| 3842362 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.63 | 51.0 | 4.97e-01 | 100.0% | 81.1% |
| 4017740 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 55.0 | 4.94e-01 | 98.9% | 93.3% |
| 3408176 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 42.0 | 3.77e-01 | 70.1% | 80.8% |
| 3876669 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.61 | 55.0 | 5.01e-01 | 100.0% | 91.3% |
| 3483566 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 49.0 | 4.58e-01 | 100.0% | 72.4% |
| 3322460 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.59 | 45.0 | 4.14e-01 | 100.0% | 61.7% |
| 3650296 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.59 | 45.0 | 4.41e-01 | 100.0% | 74.7% |
| 3358748 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.58 | 44.0 | 4.58e-01 | 100.0% | 86.3% |
| 3541127 | 2.1.1.170 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_OB2 | 0.58 | 40.0 | 4.25e-01 | 78.2% | 82.7% |
| 3580096 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 41.0 | 3.65e-01 | 73.6% | 84.0% |
| 3264469 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.58 | 42.0 | 4.32e-01 | 100.0% | 80.0% |
| 3819724 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 52.0 | 4.04e-01 | 100.0% | 56.8% |
| 4386715 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.57 | 47.0 | 4.80e-01 | 98.9% | 92.9% |
| 4173092 | 222.2.1.1 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Insertion domain in thioesterase › Insertion domain in thioesterase › FAS1_thioest_ins | 0.56 | 49.0 | 4.65e-01 | 100.0% | 96.2% |
| 3958663 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.56 | 42.0 | 3.39e-01 | 81.6% | 56.7% |
| 3676791 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 40.0 | 4.24e-01 | 74.7% | 86.7% |
| 4484730 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.55 | 44.0 | 4.21e-01 | 95.4% | 77.0% |
| 3285903 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.54 | 43.0 | 3.64e-01 | 88.5% | 96.8% |
| 3958888 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 40.0 | 3.40e-01 | 80.5% | 62.6% |
| 3472685 | 3324.1.1.2 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.54 | 48.0 | 3.40e-01 | 100.0% | 37.4% |
| 3698605 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.54 | 40.0 | 3.87e-01 | 80.5% | 72.0% |
| 1871052 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.53 | 38.0 | 3.06e-01 | 74.7% | 52.7% |
| 3445705 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 39.0 | 4.26e-01 | 82.8% | 97.1% |
| 3961892 | 243.1.1.77 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 | 0.53 | 38.0 | 3.33e-01 | 75.9% | 64.3% |
| 3969465 | 6043.1.1.0 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like | 0.53 | 33.0 | 3.44e-01 | 80.5% | 67.5% |
| 4927342 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 39.0 | 3.94e-01 | 80.5% | 98.9% |
| 2701774 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.52 | 40.0 | 3.41e-01 | 86.2% | 81.4% |
| 3586662 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 46.0 | 4.17e-01 | 100.0% | 84.2% |
| 3783834 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 38.0 | 2.82e-01 | 80.5% | 95.3% |
| 3802971 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.52 | 39.0 | 3.34e-01 | 82.8% | 68.7% |
| 3254982 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.52 | 35.0 | 3.80e-01 | 71.3% | 100.0% |
| 3935471 | 4292.1.1.0 ↗ | a+b two layers › FlaG-like › FlaG-related › FlaG-related | 0.51 | 39.0 | 4.02e-01 | 97.7% | 85.9% |
| 4457231 | 2.16.1.1 ↗ | beta barrels › OB-fold › EutN/CcmL-like › EutN/CcmL-like › EutN_CcmL | 0.50 | 43.0 | 4.11e-01 | 92.0% | 82.8% |
| 3673251 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.50 | 40.0 | 3.29e-01 | 89.7% | 74.9% |
| 4012966 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 37.0 | 3.31e-01 | 78.2% | 83.2% |
| 3284807 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.50 | 36.0 | 3.20e-01 | 77.0% | 64.4% |