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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00052
Bact-VirS2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00052
Identity
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-119
Domain cluster:
rep: OQ623132.1__WGH50158.1__X__00044__D2-127
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u7iA01 | 3.30.720.100 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.64 | 30.0 | 3.89e-01 | 75.9% | 77.3% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 39.0 | 3.85e-01 | 98.2% | 60.5% |
| 2kxgA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 44.0 | 4.76e-01 | 95.5% | 91.6% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 36.0 | 4.41e-01 | 98.2% | 97.2% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 34.0 | 3.97e-01 | 86.6% | 84.0% |
| 1e50B00 | 2.40.250.10 | Mainly Beta › Beta Barrel › Polyomavirus Enhancer Binding Protein 2; Chain: A; › Core binding factor, beta subunit | 0.56 | 39.0 | 3.72e-01 | 82.1% | 62.3% |
| 3ke7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 4.21e-01 | 86.6% | 89.5% |
| 3pzfA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 43.0 | 3.65e-01 | 83.0% | 98.3% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 36.0 | 3.46e-01 | 70.5% | 99.2% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 25.0 | 3.34e-01 | 77.7% | 86.7% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 42.0 | 4.25e-01 | 88.4% | 96.4% |
| 1n7vA02 | 2.60.330.10 | Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 | 0.51 | 42.0 | 4.12e-01 | 96.4% | 80.5% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.51 | 42.0 | 2.99e-01 | 94.6% | 30.5% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 42.0 | 3.93e-01 | 90.2% | 80.9% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.50 | 39.0 | 2.77e-01 | 86.6% | 42.9% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 43.0 | 4.03e-01 | 94.6% | 75.0% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.50 | 35.0 | 3.23e-01 | 88.4% | 54.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3349878 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.60 | 37.0 | 3.12e-01 | 99.1% | 37.0% |
| 3615838 | 517.1.1.1 ↗ | beta barrels › CBF-like › Core binding factor beta, CBF › Core binding factor beta, CBF › CBF_beta | 0.59 | 39.0 | 3.64e-01 | 89.3% | 54.8% |
| 4545039 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 36.0 | 4.46e-01 | 82.1% | 100.0% |
| 5079230 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 36.0 | 3.70e-01 | 96.4% | 64.8% |
| 5045854 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.58 | 39.0 | 4.49e-01 | 85.7% | 95.0% |
| 3937722 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 46.0 | 4.54e-01 | 99.1% | 80.0% |
| 3929846 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 40.0 | 2.86e-01 | 89.3% | 26.9% |
| 4033519 | 243.3.1.30 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3139 | 0.54 | 34.0 | 3.80e-01 | 86.6% | 82.4% |
| 4578621 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.54 | 34.0 | 2.73e-01 | 100.0% | 31.8% |
| 5018908 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.53 | 38.0 | 3.55e-01 | 73.2% | 93.3% |
| 3260639 | 517.1.1.0 ↗ | beta barrels › CBF-like › Core binding factor beta, CBF › Core binding factor beta, CBF | 0.52 | 39.0 | 3.93e-01 | 82.1% | 76.3% |
| 3744781 | 109.4.1.69 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IKI3 | 0.52 | 44.0 | 3.21e-01 | 91.1% | 77.3% |
| 162525 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.51 | 29.0 | 3.08e-01 | 89.3% | 58.8% |
| 3669917 | 243.1.1.50 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › LIM_bind | 0.51 | 42.0 | 3.28e-01 | 91.1% | 66.0% |