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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00228

Bact-Vir

S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00228

Identity

Kingdom:
phage

Quality

61.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 233-293
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 61.0 5.76e-01 73.8% 70.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 60.0 5.85e-01 72.1% 78.5%
1ug1A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 58.0 5.01e-01 73.8% 68.5%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 56.0 6.04e-01 70.5% 94.1%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 56.0 5.60e-01 72.1% 98.4%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 59.0 5.34e-01 77.0% 77.8%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 55.0 5.60e-01 70.5% 98.3%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 56.0 4.71e-01 72.1% 59.2%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 54.0 5.62e-01 70.5% 100.0%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.80 55.0 5.22e-01 72.1% 84.7%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 55.0 5.30e-01 72.1% 85.3%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 56.0 5.16e-01 75.4% 77.2%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 56.0 5.39e-01 75.4% 88.6%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 53.0 5.29e-01 70.5% 93.7%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 54.0 4.99e-01 72.1% 70.1%
2creA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 54.0 5.12e-01 72.1% 85.9%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 53.0 5.44e-01 70.5% 98.2%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 54.0 5.07e-01 73.8% 89.3%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.77 56.0 4.01e-01 77.0% 68.3%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 56.0 4.58e-01 77.0% 63.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.52e-01 77.0% 79.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 52.0 5.11e-01 72.1% 91.0%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.73 49.0 5.03e-01 70.5% 85.0%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 54.0 3.68e-01 78.7% 30.0%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 52.0 4.86e-01 77.0% 98.7%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.70 47.0 4.40e-01 70.5% 82.9%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 47.0 4.70e-01 70.5% 95.2%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 50.0 4.72e-01 78.7% 97.4%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 45.0 4.86e-01 70.5% 98.0%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 45.0 4.19e-01 70.5% 85.5%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.65 45.0 4.26e-01 72.1% 93.2%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 43.0 4.23e-01 70.5% 71.2%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 52.0 4.73e-01 88.5% 76.2%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 50.0 4.85e-01 86.9% 90.0%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.62 43.0 4.14e-01 72.1% 76.1%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.62 43.0 4.12e-01 72.1% 76.1%
3nksA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 45.0 2.72e-01 80.3% 96.3%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 46.0 4.13e-01 82.0% 81.0%
3lovA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 44.0 3.36e-01 80.3% 86.8%
7r3mA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 39.0 3.68e-01 70.5% 74.4%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.59 41.0 3.84e-01 73.8% 76.6%
2b9wA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 42.0 2.97e-01 80.3% 91.4%
2ywlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 41.0 3.09e-01 80.3% 86.6%
2bc0A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 45.0 3.19e-01 93.4% 89.4%
4cswA02 3.40.366.30 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 0.56 38.0 2.83e-01 72.1% 29.0%
3oc4B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 3.27e-01 93.4% 97.3%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 35.0 2.40e-01 75.4% 22.3%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4665407 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.92 62.0 6.89e-01 70.5% 88.0%
4053957 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.90 62.0 6.86e-01 72.1% 90.0%
4369736 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.88 58.0 6.64e-01 70.5% 91.1%
3305577 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.88 61.0 6.42e-01 72.1% 85.5%
4336500 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.86 61.0 6.44e-01 73.8% 85.5%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 59.0 5.74e-01 70.5% 73.8%
3923675 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.86 60.0 5.93e-01 73.8% 93.8%
3338134 4.1.1.155 ↗ beta barrels › SH3 › SH3 › SH3 › CRR42-like 0.86 60.0 5.60e-01 73.8% 90.7%
3436022 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.84 57.0 6.04e-01 70.5% 81.8%
4627221 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.84 58.0 5.69e-01 72.1% 69.2%
3882808 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.84 59.0 5.48e-01 73.8% 78.7%
162441 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.83 57.0 5.46e-01 72.1% 81.7%
3501560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 58.0 5.03e-01 73.8% 74.4%
3231675 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.83 60.0 5.76e-01 77.0% 90.0%
3599257 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 57.0 5.61e-01 72.1% 90.8%
3517728 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.82 58.0 5.54e-01 73.8% 72.9%
3763060 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.82 56.0 5.40e-01 72.1% 94.3%
3906249 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.81 56.0 5.22e-01 72.1% 77.3%
2121553 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 55.0 5.27e-01 70.5% 85.7%
3888226 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.80 56.0 5.17e-01 72.1% 81.3%
3721794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 58.0 5.88e-01 75.4% 88.3%
3411714 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 65.0 6.21e-01 86.9% 94.3%
3417443 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 56.0 5.37e-01 73.8% 85.5%
3773481 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.79 60.0 5.44e-01 80.3% 85.0%
3483375 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 56.0 5.19e-01 73.8% 92.0%
3539094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 55.0 4.98e-01 72.1% 83.7%
4610859 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 54.0 5.33e-01 72.1% 89.2%
3585447 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 57.0 5.19e-01 77.0% 76.2%
3931418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 53.0 5.39e-01 70.5% 95.0%
3755099 604.1.1.97 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SH3_1 0.78 57.0 5.08e-01 77.0% 71.8%
3919980 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 53.0 5.21e-01 70.5% 87.7%
3821919 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.78 58.0 5.90e-01 91.8% 80.0%
4020558 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 55.0 5.43e-01 75.4% 95.4%
3470815 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.77 54.0 5.20e-01 73.8% 95.7%
3366511 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 53.0 5.22e-01 72.1% 89.2%
3858084 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.76 59.0 4.39e-01 82.0% 62.1%
4508412 4.1.1.437 ↗ beta barrels › SH3 › SH3 › SH3 › PF29224 0.76 53.0 5.38e-01 73.8% 98.3%
3573775 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 56.0 5.51e-01 78.7% 96.9%
3476478 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 55.0 4.69e-01 77.0% 54.7%
3996278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 56.0 4.40e-01 78.7% 40.8%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 51.0 5.14e-01 70.5% 88.3%
3517456 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.75 51.0 4.76e-01 70.5% 98.7%
3554994 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 56.0 4.92e-01 80.3% 75.3%
3748846 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 57.0 5.60e-01 82.0% 93.8%
3713613 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.62e-01 82.0% 95.4%
5001481 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.74 50.0 4.67e-01 70.5% 86.7%
194032 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 51.0 4.70e-01 75.4% 78.8%
3170251 4.1.1.170 ↗ beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.71 63.0 4.78e-01 96.7% 93.6%
1031943 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 50.0 4.76e-01 75.4% 83.8%
5036621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 48.0 4.99e-01 70.5% 85.5%
4930563 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.70 47.0 4.56e-01 70.5% 85.7%
5049033 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.70 47.0 4.45e-01 70.5% 85.3%
5063433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 47.0 5.06e-01 70.5% 94.0%
1678740 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.69 46.0 4.30e-01 70.5% 83.3%
3883895 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 57.0 4.86e-01 93.4% 93.0%
4957350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 48.0 4.75e-01 75.4% 73.8%
135285 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 45.0 4.17e-01 70.5% 80.8%
5030535 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 46.0 4.31e-01 72.1% 89.3%
4952478 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.66 45.0 4.22e-01 70.5% 84.0%
3801719 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 57.0 5.47e-01 98.4% 98.6%
158911 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 56.0 4.80e-01 100.0% 76.3%
3269758 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 54.0 4.96e-01 96.7% 82.5%
165220 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 49.0 4.68e-01 98.4% 87.7%
3648535 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.53 44.0 3.39e-01 100.0% 66.9%
D2 medium residues 97-182
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gmuA01 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.84 54.0 6.07e-01 72.1% 83.6%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.84 56.0 5.99e-01 72.1% 78.4%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.82 57.0 6.43e-01 70.9% 95.5%
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.82 52.0 5.81e-01 72.1% 81.2%
1jqgA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.79 56.0 5.53e-01 73.3% 70.3%
2f1fA02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.78 54.0 5.71e-01 73.3% 79.5%
2fgcA03 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.78 53.0 5.59e-01 73.3% 78.9%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.78 53.0 5.73e-01 70.9% 100.0%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.77 53.0 5.62e-01 73.3% 80.5%
2w01B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.77 59.0 4.50e-01 82.6% 87.8%
1fx2A00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.76 59.0 4.27e-01 82.6% 84.7%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.76 54.0 5.63e-01 73.3% 92.2%
3r5gA00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.76 58.0 4.47e-01 82.6% 90.3%
1ybtB00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.76 58.0 4.63e-01 82.6% 89.0%
1azsA00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.75 58.0 4.46e-01 82.6% 89.5%
4wp3C00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.74 57.0 4.44e-01 82.6% 81.8%
2hvzA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.74 51.0 5.48e-01 70.9% 98.6%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 52.0 5.19e-01 73.3% 84.3%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.73 51.0 5.30e-01 72.1% 96.2%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 51.0 4.95e-01 73.3% 77.6%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.73 51.0 5.27e-01 72.1% 83.7%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 51.0 4.83e-01 73.3% 72.8%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 52.0 5.15e-01 75.6% 83.3%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 50.0 5.19e-01 72.1% 97.5%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 51.0 5.62e-01 75.6% 97.1%
1s5jA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.71 49.0 4.07e-01 72.1% 74.5%
1darA05 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 49.0 4.97e-01 72.1% 75.9%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.71 51.0 5.52e-01 75.6% 89.0%
2zbcA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.71 49.0 5.26e-01 72.1% 94.5%
4dezA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.70 51.0 4.95e-01 77.9% 86.9%
2h5eA03 3.30.70.3280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III 0.69 48.0 4.11e-01 72.1% 48.2%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 48.0 4.76e-01 73.3% 78.5%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 51.0 5.21e-01 79.1% 81.2%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.69 48.0 4.70e-01 73.3% 85.1%
4pwuC00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 49.0 5.14e-01 75.6% 93.6%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.68 53.0 5.05e-01 83.7% 77.0%
1vw4F02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.68 48.0 4.70e-01 73.3% 90.2%
2i8eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 47.0 4.94e-01 72.1% 93.2%
1bqnA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.67 48.0 4.71e-01 75.6% 84.0%
3lduA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.66 56.0 4.39e-01 93.0% 69.4%
2hiyA01 3.30.70.1280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains 0.66 46.0 4.58e-01 72.1% 80.7%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 47.0 4.95e-01 75.6% 97.4%
3ldgA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.64 54.0 4.23e-01 95.3% 64.4%
3hdiA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.60 43.0 3.32e-01 77.9% 80.1%
4mo0A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.59 41.0 4.23e-01 73.3% 78.5%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.58 43.0 4.27e-01 81.4% 91.5%
2o0bA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.52 37.0 2.79e-01 74.4% 88.8%
6gpxB00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 39.0 2.80e-01 81.4% 56.3%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 36.0 3.11e-01 80.2% 46.7%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4576277 304.22.1.1 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.85 54.0 5.96e-01 72.1% 80.0%
5035614 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.84 56.0 6.63e-01 70.9% 98.3%
4174001 304.22.1.1 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.83 53.0 6.04e-01 72.1% 86.2%
5301 304.24.1.2 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 0.82 57.0 6.39e-01 70.9% 94.0%
5293 304.22.1.1 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.82 52.0 5.85e-01 72.1% 82.4%
5006888 304.22.1.2 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › PF26257 0.80 51.0 5.61e-01 72.1% 80.0%
4299576 304.8.1.7 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C 0.80 56.0 5.69e-01 73.3% 74.7%
4309637 1036.1.1.1 ↗ a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 0.80 56.0 5.72e-01 76.7% 75.0%
3674181 304.8.1.7 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C 0.79 55.0 5.19e-01 73.3% 61.0%
5028545 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.78 57.0 5.96e-01 76.7% 85.0%
4950693 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.78 57.0 5.75e-01 75.6% 81.2%
5035636 304.26.1.1 ↗ a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.78 54.0 5.17e-01 72.1% 75.0%
5082143 304.26.1.1 ↗ a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.77 54.0 5.10e-01 73.3% 71.4%
3373939 304.11.1.11 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SBDS_C 0.77 54.0 5.62e-01 73.3% 78.8%
3386186 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.77 56.0 5.65e-01 75.6% 87.1%
4651197 304.120.1.5 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st 0.77 51.0 5.89e-01 75.6% 98.3%
3949749 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.76 53.0 6.00e-01 75.6% 95.4%
5024525 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 46.0 5.49e-01 74.4% 94.5%
5033768 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.75 52.0 5.80e-01 72.1% 93.8%
5007807 304.26.1.1 ↗ a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.75 52.0 5.09e-01 72.1% 77.9%
4975038 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.75 51.0 5.75e-01 72.1% 93.8%
5049019 304.26.1.1 ↗ a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.75 53.0 4.96e-01 73.3% 72.8%
4965698 304.22.1.0 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain 0.74 51.0 5.34e-01 72.1% 82.5%
4059719 304.9.1.61 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Thc1_RRM 0.74 52.0 5.57e-01 73.3% 88.0%
4043627 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 56.0 5.97e-01 79.1% 94.7%
5060568 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.74 49.0 5.63e-01 70.9% 96.7%
4215974 304.22.1.1 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.74 50.0 5.46e-01 72.1% 85.7%
5065806 304.8.1.7 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C 0.73 52.0 5.72e-01 76.7% 91.4%
4246030 304.120.1.5 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st 0.73 48.0 5.51e-01 72.1% 96.7%
4632150 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.73 53.0 5.15e-01 75.6% 77.9%
5040129 304.26.1.1 ↗ a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.73 51.0 4.99e-01 73.3% 76.8%
5019341 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.72 51.0 5.64e-01 75.6% 91.4%
5082240 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.72 49.0 5.07e-01 75.6% 75.0%
5024215 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.72 56.0 5.06e-01 82.6% 77.4%
3810151 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.72 51.0 5.50e-01 73.3% 91.4%
3248261 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.72 52.0 5.65e-01 75.6% 94.3%
4166108 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.71 51.0 5.12e-01 76.7% 93.3%
3475155 304.9.1.84 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 0.70 51.0 4.92e-01 75.6% 71.6%
4979747 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.70 48.0 5.23e-01 72.1% 95.7%
5076614 2484.1.1.328 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B 0.70 48.0 2.89e-01 72.1% 27.8%
5071118 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.69 48.0 5.34e-01 72.1% 96.9%
4988554 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 48.0 5.33e-01 72.1% 100.0%
4107410 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.69 49.0 5.14e-01 73.3% 90.7%
4945605 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.69 47.0 5.21e-01 70.9% 96.9%
3623508 304.9.1.84 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 0.69 50.0 4.67e-01 75.6% 68.6%
5000652 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.69 52.0 4.07e-01 80.2% 88.3%
4989002 304.120.1.5 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st 0.68 46.0 5.15e-01 72.1% 98.3%
3317753 304.37.1.1 ↗ a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr 0.68 48.0 5.02e-01 74.4% 80.0%
4958999 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.68 46.0 5.11e-01 70.9% 98.5%
4983407 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.68 47.0 5.18e-01 72.1% 96.9%
3387138 304.110.1.0 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.68 47.0 4.96e-01 72.1% 93.3%
3708806 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.67 47.0 3.51e-01 73.3% 56.4%
4973212 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.67 46.0 5.09e-01 72.1% 95.4%
3973554 306.3.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.65 44.0 4.43e-01 76.7% 69.3%
3245966 304.48.1.11 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.64 44.0 3.77e-01 70.9% 96.4%
4235437 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.63 43.0 4.26e-01 72.1% 69.5%
4929591 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.63 43.0 4.29e-01 73.3% 68.5%
4184923 3016.1.1.10 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › GDC-P 0.62 46.0 4.74e-01 81.4% 83.7%
4237486 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.62 43.0 3.61e-01 91.9% 40.6%
5048601 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.60 41.0 3.99e-01 72.1% 72.7%
4536378 3016.1.1.10 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › GDC-P 0.60 44.0 4.58e-01 77.9% 83.7%