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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00283
Bact-VirS2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00283
Identity
- Kingdom:
- phage
Quality
71.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-163
Domain cluster:
rep: MN497415.1__QGH73801.1__X__00010__D3-143
D2
high
residues 179-286
Domain cluster:
rep: AP018399.1__BBA65726.1__X__00578__D180-281
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 29.0 | 3.39e-01 | 88.0% | 72.4% |
| 1k5dB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 47.0 | 4.24e-01 | 95.4% | 72.6% |
| 2oqbA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 40.0 | 4.06e-01 | 93.5% | 82.4% |
| 2sliA03 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.51 | 27.0 | 2.78e-01 | 76.9% | 52.0% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.51 | 29.0 | 3.47e-01 | 86.1% | 90.8% |
| 3n6rA04 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.50 | 23.0 | 2.70e-01 | 73.1% | 58.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1851176 | 5092.1.1.0 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins | 0.59 | 33.0 | 3.06e-01 | 89.8% | 41.9% |
| 3736744 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 49.0 | 4.52e-01 | 96.3% | 88.6% |
| 3991921 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 44.0 | 4.35e-01 | 93.5% | 81.6% |
| 4607738 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.55 | 35.0 | 3.49e-01 | 88.9% | 62.7% |
| 4400596 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.54 | 38.0 | 3.33e-01 | 72.2% | 48.8% |
| 3269834 | 220.1.1.95 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH | 0.52 | 42.0 | 4.03e-01 | 94.4% | 74.4% |
| 4932697 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 26.0 | 3.12e-01 | 88.9% | 72.3% |
| 3508939 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.51 | 43.0 | 4.10e-01 | 97.2% | 76.2% |
| 3716204 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.50 | 41.0 | 4.07e-01 | 97.2% | 83.5% |
D3
high
residues 291-331_346-397