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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00333
Bact-VirS2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00333
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-139
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_0-10091_curated_closed_complete_start-adj_prodigal-single.1__X__X__00629__D3-103
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 39.0 | 3.68e-01 | 100.0% | 53.1% |
| 2qdeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 38.0 | 3.48e-01 | 100.0% | 53.7% |
| 4g1lA01 | 2.70.20.50 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain | 0.53 | 37.0 | 3.26e-01 | 73.3% | 74.2% |
| 1tlyA00 | 2.40.230.20 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like | 0.52 | 37.0 | 2.82e-01 | 74.3% | 98.0% |
| 2i1sA00 | 3.10.290.30 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like | 0.51 | 41.0 | 3.44e-01 | 85.7% | 72.5% |
| 4hynB00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.50 | 44.0 | 3.64e-01 | 100.0% | 61.4% |
| 1ohfA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 36.0 | 2.72e-01 | 77.1% | 76.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4541077 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.56 | 44.0 | 4.06e-01 | 85.7% | 90.7% |
| 3690734 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.56 | 38.0 | 3.30e-01 | 70.5% | 96.4% |
| 4654177 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.54 | 41.0 | 3.13e-01 | 80.0% | 67.3% |
| 3399085 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.53 | 37.0 | 2.76e-01 | 71.4% | 54.1% |
| 3724985 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.52 | 36.0 | 3.47e-01 | 100.0% | 60.8% |