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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00412
Bact-VirS2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00412
Identity
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-96
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vp7A00 | 1.10.287.1040 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit | 0.84 | 71.0 | 6.45e-01 | 90.4% | 76.5% |
| 3q23A03 | 6.10.140.1360 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 69.0 | 6.16e-01 | 94.2% | 80.6% |
| 7tj9A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.75 | 61.0 | 4.87e-01 | 92.3% | 50.9% |
| 7jplA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 58.0 | 4.56e-01 | 90.4% | 43.6% |
| 7zqiA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.69 | 55.0 | 3.81e-01 | 88.5% | 45.5% |
| 3bezA02 | 3.40.1750.10 | Alpha Beta › 3-Layer(aba) Sandwich › peptide peptidase (sppa) fold › peptide peptidase (sppa) like domain | 0.67 | 54.0 | 4.36e-01 | 88.5% | 68.0% |
| 1o57A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.77e-01 | 86.5% | 69.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3315417 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.78 | 67.0 | 4.41e-01 | 96.2% | 68.4% |
| 3428856 | 1145.1.1.1 ↗ | few secondary structure elements › nigellin-1.1 › nigellin-1.1 › nigellin-1.1 › Per1 | 0.72 | 62.0 | 4.98e-01 | 96.2% | 82.0% |
| 5000380 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.57 | 43.0 | 3.90e-01 | 84.6% | 68.0% |