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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00426

Bact-Vir

S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00426

Identity

Kingdom:
phage

Quality

93.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-91
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 40.0 4.85e-01 79.8% 72.1%
1hxiA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 38.0 3.48e-01 79.8% 37.5%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 39.0 3.70e-01 79.8% 42.6%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 38.0 3.08e-01 77.5% 27.0%
4u04B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 38.0 3.87e-01 79.8% 48.9%
1ng6A01 1.10.1510.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain 0.72 65.0 6.46e-01 100.0% 97.8%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.71 45.0 4.94e-01 76.4% 77.0%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.69 44.0 4.75e-01 76.4% 76.0%
2ehwA00 6.10.140.1220 Special › Helix non-globular › Helix Hairpins › 0.63 48.0 4.37e-01 79.8% 74.8%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 41.0 4.44e-01 79.8% 80.0%
2hjmA01 1.20.120.460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like 0.61 50.0 5.12e-01 95.5% 89.5%
3rc3A05 1.20.58.1080 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 41.0 3.83e-01 94.4% 55.8%
3dpjF00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 40.0 3.13e-01 73.0% 32.4%
1dpsA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 53.0 4.36e-01 100.0% 70.4%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 43.0 4.40e-01 79.8% 80.0%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.58 47.0 3.83e-01 87.6% 51.8%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.56 40.0 4.22e-01 80.9% 82.3%
2w0gA00 1.20.58.610 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain 0.56 41.0 3.64e-01 77.5% 74.4%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.55 49.0 4.55e-01 100.0% 94.0%
3t6gB00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.55 45.0 3.97e-01 95.5% 59.0%
5j1hA01 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 39.0 3.11e-01 79.8% 36.8%
1zu2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 45.0 3.68e-01 91.0% 57.6%
1elwA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 40.0 3.56e-01 86.5% 59.0%
2vxgA02 1.10.220.100 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 0.52 45.0 4.64e-01 98.9% 95.3%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.52 43.0 3.70e-01 94.4% 72.7%
2pziB03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 45.0 3.68e-01 92.1% 87.3%
6i57A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 39.0 3.41e-01 78.7% 56.0%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.51 38.0 3.54e-01 82.0% 80.3%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3817383 109.4.1.401 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NRDE-2 0.78 49.0 4.47e-01 80.9% 49.6%
3274169 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.74 48.0 2.89e-01 76.4% 11.8%
4262515 610.4.1.1 alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY 0.73 66.0 6.37e-01 100.0% 88.0%
3178110 610.4.1.1 alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY 0.73 66.0 5.33e-01 100.0% 53.3%
3274908 616.1.1.1 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 0.71 49.0 4.00e-01 76.4% 40.3%
3832084 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.70 47.0 5.14e-01 77.5% 81.3%
3576223 604.33.1.1 alpha bundles › Spectrin repeat-like › Repulsive guidance molecule (RGM) N-terminal domain › Repulsive guidance molecule (RGM) N-terminal domain › RGM_N 0.70 45.0 4.92e-01 79.8% 78.4%
3596831 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.69 50.0 5.42e-01 100.0% 89.3%
3728650 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.68 46.0 5.11e-01 76.4% 87.1%
3689475 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.67 44.0 4.90e-01 76.4% 84.3%
3635885 109.4.1.18 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPTA 0.63 52.0 4.08e-01 86.5% 59.4%
3594436 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.59 52.0 4.77e-01 100.0% 81.7%
4969545 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 47.0 3.48e-01 100.0% 32.0%
3936950 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 43.0 4.13e-01 98.9% 69.0%
3625611 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.57 43.0 2.89e-01 80.9% 27.4%
4995916 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.56 40.0 3.93e-01 91.0% 69.5%
3981750 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.55 42.0 2.95e-01 80.9% 58.9%
4943739 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.55 49.0 4.39e-01 100.0% 70.4%
5022239 4156.1.1.7 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DUF5814 0.54 44.0 3.67e-01 95.5% 50.0%
5060592 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.54 42.0 3.62e-01 84.3% 84.1%
3291243 3755.3.1.458 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF4407 0.52 43.0 3.56e-01 91.0% 78.2%
3788706 109.4.1.163 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N 0.52 44.0 2.60e-01 91.0% 15.5%
3285329 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.51 44.0 3.49e-01 100.0% 47.7%
D2 high residues 98-149
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ng6A02 1.10.10.410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.83 73.0 7.10e-01 100.0% 91.2%
2dodA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.75 62.0 5.40e-01 100.0% 59.8%
7vw6B01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.74 58.0 5.44e-01 100.0% 68.7%
2ja2A05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 62.0 5.08e-01 100.0% 72.4%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 60.0 5.84e-01 100.0% 86.7%
2hvrA03 1.10.10.1810 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA ligase 0.71 60.0 5.18e-01 100.0% 82.8%
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.60e-01 100.0% 92.5%
3bniB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 56.0 4.01e-01 100.0% 34.5%
4zvaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.67 56.0 4.15e-01 100.0% 83.9%
1j09A05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 56.0 4.68e-01 100.0% 71.4%
3besR03 6.10.140.1480 Special › Helix non-globular › Helix Hairpins › 0.67 46.0 4.59e-01 75.0% 73.2%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.66 56.0 4.98e-01 100.0% 84.6%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.65 53.0 5.12e-01 100.0% 83.6%
3wfwA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.65 44.0 3.30e-01 71.2% 28.3%
1or4B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.65 53.0 3.92e-01 100.0% 77.8%
3eupB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 54.0 3.66e-01 100.0% 37.5%
5x9vA01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.62 42.0 2.76e-01 71.2% 99.2%
1gcvB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.62 51.0 3.92e-01 100.0% 86.8%
4u2vA02 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.61 52.0 4.59e-01 100.0% 68.8%
2zxyA00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.61 51.0 4.42e-01 100.0% 93.0%
2f33A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 49.0 4.31e-01 100.0% 73.6%
5ko4A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.59 44.0 3.71e-01 86.5% 76.2%
3lynB00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.59 48.0 3.70e-01 94.2% 58.1%
8d3mA02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.58 38.0 2.47e-01 84.6% 14.6%
2i71A02 1.10.3740.10 Mainly Alpha › Orthogonal Bundle › SSO1389-like fold › SSO1389-like domains 0.54 44.0 3.32e-01 98.1% 80.4%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 40.0 3.85e-01 80.8% 73.8%
1vb3A01 3.90.1380.10 Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain 0.53 46.0 3.99e-01 98.1% 81.5%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 44.0 3.69e-01 100.0% 82.2%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 47.0 4.01e-01 100.0% 72.6%
1mhyG02 1.20.1280.30 Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 0.53 43.0 4.01e-01 100.0% 75.3%
2guzB00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.53 42.0 4.02e-01 100.0% 96.9%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 45.0 3.64e-01 98.1% 92.2%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.52 43.0 3.47e-01 100.0% 81.0%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.52 40.0 3.34e-01 90.4% 88.1%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 42.0 3.90e-01 100.0% 72.9%
3gn4A00 6.10.220.10 Special › Helix non-globular › Helical scaffold and wing domains of SecA › 0.51 34.0 2.70e-01 71.2% 30.2%
1q90B00 1.20.810.10 Mainly Alpha › Up-down Bundle › Cytochrome Bc1 Complex; Chain C › Cytochrome Bc1 Complex; Chain C 0.51 42.0 2.93e-01 100.0% 63.2%
2el7A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.51 37.0 3.18e-01 80.8% 47.9%
2i76A02 1.10.1040.20 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › ProC-like, C-terminal domain 0.51 43.0 3.52e-01 100.0% 76.9%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5068704 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.90 81.0 5.53e-01 98.1% 31.5%
4971469 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.89 80.0 5.44e-01 100.0% 32.0%
4975642 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.89 80.0 5.43e-01 100.0% 32.0%
5057835 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.89 80.0 5.48e-01 100.0% 32.4%
5028090 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.88 75.0 5.30e-01 98.1% 33.1%
4493137 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.88 80.0 5.42e-01 100.0% 33.7%
4393397 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.88 79.0 5.31e-01 100.0% 31.1%
5064744 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.87 78.0 5.36e-01 100.0% 32.9%
None 0.87 78.0 5.30e-01 100.0% 32.0%
4280938 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.87 78.0 5.30e-01 100.0% 32.0%
4983306 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.87 78.0 5.30e-01 100.0% 32.0%
None 0.87 76.0 5.23e-01 98.1% 32.4%
4974579 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.87 77.0 5.20e-01 100.0% 30.3%
5040600 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.87 77.0 5.32e-01 100.0% 33.9%
4183319 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.86 76.0 5.21e-01 100.0% 32.0%
5054119 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.86 77.0 5.51e-01 100.0% 37.9%
4938494 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.84 74.0 5.97e-01 100.0% 56.0%
5047616 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.84 74.0 5.13e-01 100.0% 32.9%
4064960 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.84 75.0 5.07e-01 100.0% 32.8%
4501343 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.83 68.0 6.73e-01 100.0% 85.5%
4050582 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.82 72.0 4.99e-01 100.0% 33.9%
4057733 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.82 72.0 4.70e-01 100.0% 28.2%
5058390 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.82 70.0 4.82e-01 96.2% 32.8%
4487261 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.81 72.0 4.97e-01 100.0% 34.7%
4355585 101.1.1.304 alpha arrays › HTH › HTH › Three-helical HTH › GatB_Yqey 0.81 71.0 6.84e-01 100.0% 98.3%
4943778 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.80 70.0 4.84e-01 100.0% 34.3%
4942515 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.80 70.0 4.89e-01 100.0% 32.9%
4932213 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.78 68.0 4.74e-01 100.0% 32.9%
4396894 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.77 67.0 4.66e-01 100.0% 32.8%
4680947 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.76 65.0 5.44e-01 100.0% 69.5%
4251816 4973.1.1.1 alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind 0.76 62.0 5.81e-01 92.3% 84.6%
4937450 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.76 66.0 4.44e-01 100.0% 29.1%
4530961 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.75 64.0 4.35e-01 100.0% 27.3%
3906103 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.75 66.0 6.15e-01 100.0% 80.0%
3931563 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.73 62.0 5.98e-01 100.0% 91.7%
4660186 2008.1.1.159 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 0.73 62.0 3.91e-01 100.0% 21.1%
3568587 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.73 62.0 4.31e-01 98.1% 30.6%
5028520 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.73 60.0 4.25e-01 96.2% 32.6%
3534466 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.71 63.0 5.86e-01 100.0% 80.0%
4054265 101.8.1.2 alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.71 61.0 4.15e-01 100.0% 32.5%
3237792 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.71 59.0 5.37e-01 100.0% 73.3%
4446563 101.1.2.318 alpha arrays › HTH › HTH › winged helix domain › HSD3 0.71 59.0 5.71e-01 100.0% 86.7%
4310342 101.8.1.2 alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.70 60.0 4.09e-01 100.0% 33.3%
4305007 101.35.1.21 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF494 0.69 58.0 5.46e-01 100.0% 78.5%
3913391 108.1.1.12 alpha arrays › EF-hand › EF-hand-related › EF-hand › p25-alpha 0.68 57.0 5.33e-01 96.2% 92.3%
3643932 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 4.87e-01 100.0% 83.5%
4942003 1101.1.1.0 alpha bundles › Uncharacterized protein LPG2271 › Uncharacterized protein LPG2271 › Uncharacterized protein LPG2271 0.66 54.0 4.69e-01 100.0% 74.4%
3386658 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.65 53.0 3.83e-01 100.0% 30.3%
3600422 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 53.0 3.10e-01 98.1% 89.6%
3369433 101.1.1.138 alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD 0.64 53.0 4.51e-01 96.2% 90.0%
3417818 101.1.1.138 alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD 0.61 51.0 4.36e-01 100.0% 92.6%
3580179 103.11.1.1 alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N 0.61 43.0 4.05e-01 80.8% 58.6%
3607327 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 44.0 4.36e-01 100.0% 88.3%
3703191 650.1.1.1 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.55 43.0 3.62e-01 94.2% 55.0%
4823825 5069.1.1.1 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrome_B 0.54 40.0 2.63e-01 82.7% 19.0%
4994844 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.54 46.0 3.09e-01 100.0% 58.6%
5057661 650.1.1.1 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.52 43.0 3.80e-01 100.0% 69.4%
3176783 5069.1.1.1 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrome_B 0.51 42.0 3.05e-01 100.0% 52.6%
4947367 5059.1.1.0 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.51 42.0 3.31e-01 100.0% 71.2%
4355162 5069.1.1.54 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrome_B, Cytochrom_B_N_2 0.51 42.0 3.10e-01 100.0% 57.5%