←Back to structures
S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00461
Bact-VirS2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00461
Identity
- Kingdom:
- phage
Quality
93.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-50
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6e6qA00 | 1.10.10.1100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BFD-like [2Fe-2S]-binding domain | 0.83 | 75.0 | 7.15e-01 | 100.0% | 87.5% |
| 2kjfA00 | 1.20.225.10 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 | 0.61 | 48.0 | 4.59e-01 | 100.0% | 76.7% |
| 2qenA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 4.54e-01 | 100.0% | 74.3% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 4.21e-01 | 100.0% | 65.5% |
| 1ntcA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 41.0 | 3.52e-01 | 83.7% | 41.8% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 3.95e-01 | 81.6% | 75.4% |
| 5cqgA03 | 1.10.10.2210 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 46.0 | 4.11e-01 | 100.0% | 75.9% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.55 | 42.0 | 3.65e-01 | 95.9% | 68.5% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.53 | 41.0 | 3.70e-01 | 93.9% | 67.1% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.53 | 34.0 | 2.82e-01 | 71.4% | 30.7% |
| 5dqpB00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.52 | 42.0 | 2.52e-01 | 95.9% | 17.0% |
| 6ncrB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 41.0 | 2.75e-01 | 100.0% | 25.8% |
| 3me5A01 | 1.10.260.140 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.50 | 36.0 | 3.41e-01 | 95.9% | 62.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4514347 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.89 | 82.0 | 8.18e-01 | 100.0% | 98.0% |
| 3279224 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.88 | 79.0 | 7.59e-01 | 100.0% | 89.1% |
| 3291653 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.86 | 78.0 | 7.56e-01 | 100.0% | 89.1% |
| 185707 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.84 | 76.0 | 7.26e-01 | 100.0% | 86.0% |
| 4518685 | 101.32.1.2 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › SO_alpha_A3 | 0.84 | 75.0 | 6.33e-01 | 100.0% | 65.0% |
| 3963828 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.84 | 75.0 | 7.47e-01 | 100.0% | 98.0% |
| 4954971 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.83 | 74.0 | 6.42e-01 | 100.0% | 69.3% |
| 1823203 | 101.32.1.2 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › SO_alpha_A3 | 0.80 | 71.0 | 6.75e-01 | 100.0% | 91.2% |
| 4251241 | 101.32.1.2 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › SO_alpha_A3 | 0.80 | 70.0 | 5.85e-01 | 100.0% | 61.2% |
| 4928175 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.69 | 50.0 | 5.32e-01 | 95.9% | 92.9% |
| 5077786 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.62 | 45.0 | 3.98e-01 | 85.7% | 58.8% |
| 3402551 | 101.1.2.75 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIF_alpha | 0.60 | 49.0 | 4.60e-01 | 100.0% | 81.5% |
| 5069510 | 3542.1.1.2 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › SPP | 0.55 | 45.0 | 2.95e-01 | 100.0% | 51.4% |
| 4969290 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 41.0 | 3.37e-01 | 100.0% | 42.7% |