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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00534

Bact-Vir

S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00534

Identity

Kingdom:
phage

Quality

84.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 164-216_275-389
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lwxA00 1.10.8.840 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain 0.58 30.0 4.03e-01 78.6% 94.3%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3716528 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.50 30.0 3.23e-01 85.1% 67.1%
D2 medium residues 73-163_217-274
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5075237 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.55 31.0 3.84e-01 74.5% 94.1%