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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00559

Bact-Vir

S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00559

Identity

Kingdom:
phage

Quality

87.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-54
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.57 35.0 3.64e-01 90.7% 64.0%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.54 29.0 2.68e-01 100.0% 36.5%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3172490 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 41.0 3.09e-01 79.6% 36.8%
4990362 4261.1.1.1 ↗ a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C 0.54 35.0 3.23e-01 100.0% 45.6%
3737722 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.53 46.0 3.71e-01 100.0% 61.8%
4149459 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.52 40.0 2.98e-01 100.0% 30.3%
5066941 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 41.0 3.80e-01 98.1% 68.0%
3405622 221.1.1.55 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RAWUL 0.51 44.0 3.53e-01 100.0% 50.9%
3497076 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.50 43.0 3.69e-01 100.0% 62.2%