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S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00582
Bact-VirS2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00582
Identity
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-97
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gp3A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.70 | 60.0 | 4.75e-01 | 100.0% | 95.1% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 47.0 | 5.00e-01 | 100.0% | 89.6% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 5.03e-01 | 100.0% | 91.5% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.66 | 37.0 | 3.21e-01 | 100.0% | 33.7% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 56.0 | 4.54e-01 | 100.0% | 68.7% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.65 | 56.0 | 5.02e-01 | 98.2% | 93.7% |
| 2vseA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 53.0 | 4.10e-01 | 100.0% | 92.3% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 52.0 | 4.50e-01 | 100.0% | 74.0% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 42.0 | 4.66e-01 | 94.6% | 90.7% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 53.0 | 4.17e-01 | 100.0% | 58.1% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 47.0 | 4.52e-01 | 100.0% | 73.8% |
| 2kdsA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 47.0 | 4.08e-01 | 100.0% | 55.8% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 44.0 | 4.49e-01 | 100.0% | 82.1% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 43.0 | 2.91e-01 | 100.0% | 21.0% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 4.66e-01 | 100.0% | 84.5% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 48.0 | 4.04e-01 | 100.0% | 76.6% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 42.0 | 4.34e-01 | 100.0% | 83.0% |
| 4owkE00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 47.0 | 3.72e-01 | 100.0% | 94.1% |
| 4f4oC03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 46.0 | 3.96e-01 | 100.0% | 56.2% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 50.0 | 4.75e-01 | 100.0% | 84.6% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 45.0 | 3.74e-01 | 100.0% | 90.9% |
| 2cztA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 47.0 | 3.56e-01 | 100.0% | 69.7% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.56 | 40.0 | 3.17e-01 | 76.8% | 94.1% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 48.0 | 4.42e-01 | 100.0% | 78.1% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 48.0 | 4.25e-01 | 100.0% | 82.7% |
| 2dmcA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.89e-01 | 89.3% | 77.0% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 44.0 | 4.20e-01 | 100.0% | 77.9% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 39.0 | 3.43e-01 | 100.0% | 50.6% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 41.0 | 3.08e-01 | 100.0% | 33.8% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 45.0 | 4.47e-01 | 100.0% | 96.7% |
| 6eziA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 38.0 | 3.38e-01 | 82.1% | 93.0% |
| 1o9aA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.51 | 33.0 | 3.59e-01 | 87.5% | 81.8% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 41.0 | 2.58e-01 | 100.0% | 15.9% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.50 | 40.0 | 3.46e-01 | 100.0% | 94.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3609866 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.67 | 57.0 | 4.11e-01 | 100.0% | 69.1% |
| 3599325 | 220.1.1.92 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH | 0.65 | 56.0 | 4.20e-01 | 100.0% | 52.7% |
| 1283866 | 220.1.1.51 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP3_C | 0.62 | 53.0 | 4.17e-01 | 100.0% | 58.1% |
| 3712219 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.60 | 47.0 | 4.54e-01 | 100.0% | 75.4% |
| None | — | 0.59 | 49.0 | 3.91e-01 | 100.0% | 96.2% | |
| 4221708 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.59 | 49.0 | 4.56e-01 | 100.0% | 74.3% |
| 3991880 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 42.0 | 2.59e-01 | 100.0% | 12.2% |
| 3800552 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.55 | 38.0 | 3.17e-01 | 78.6% | 68.3% |
| 4940816 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 40.0 | 3.57e-01 | 89.3% | 56.8% |
| 3924183 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 3.79e-01 | 89.3% | 71.2% |
| 3500524 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.53 | 36.0 | 3.12e-01 | 100.0% | 44.4% |
| 3927342 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 37.0 | 3.07e-01 | 100.0% | 42.0% |
| 3917423 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.51 | 38.0 | 3.38e-01 | 85.7% | 87.8% |
| 3574548 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 34.0 | 2.98e-01 | 71.4% | 93.3% |
| 3912023 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.50 | 39.0 | 2.49e-01 | 100.0% | 16.1% |