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S75733.1__AAB32259.1__X__00002
Bact-VirS75733.1__AAB32259.1__X__00002
Identity
- Accession:
- S75733 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 48-174
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 33.0 | 3.37e-01 | 84.3% | 45.3% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 31.0 | 3.32e-01 | 84.3% | 47.3% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 32.0 | 3.27e-01 | 85.0% | 46.3% |
| 1dt9A01 | 3.30.960.10 | Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 | 0.63 | 36.0 | 3.95e-01 | 92.1% | 68.6% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 41.0 | 4.29e-01 | 92.9% | 72.9% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.61 | 37.0 | 3.88e-01 | 95.3% | 65.8% |
| 3ff0A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 31.0 | 2.99e-01 | 85.0% | 44.0% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 38.0 | 3.87e-01 | 93.7% | 68.0% |
| 1yc9A01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.57 | 48.0 | 3.55e-01 | 89.8% | 96.0% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.55 | 29.0 | 3.51e-01 | 84.3% | 80.5% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 30.0 | 3.52e-01 | 87.4% | 77.8% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 27.0 | 3.16e-01 | 85.0% | 69.0% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 42.0 | 3.00e-01 | 86.6% | 91.5% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 27.0 | 2.70e-01 | 83.5% | 46.6% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 24.0 | 3.25e-01 | 83.5% | 87.3% |
| 5azsC01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.50 | 41.0 | 2.98e-01 | 87.4% | 60.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3678591 | 243.3.1.12 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SQAPI | 0.74 | 32.0 | 3.74e-01 | 85.0% | 55.6% |
| 3422266 | 3562.1.1.0 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 | 0.62 | 41.0 | 4.22e-01 | 92.9% | 68.8% |
| 3445177 | 9.1.1.10 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VDE | 0.61 | 29.0 | 2.54e-01 | 83.5% | 28.9% |
| 4463998 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 46.0 | 3.43e-01 | 83.5% | 41.8% |
| 862806 | 4200.1.1.2 ↗ | beta barrels › YmcC-like › YmcC-like › YmcC-like › DUF3108_like | 0.59 | 34.0 | 2.82e-01 | 92.1% | 33.6% |
| 5079018 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 31.0 | 3.67e-01 | 82.7% | 75.3% |
| 4026119 | 11.1.4.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › EMC7_beta-sandw | 0.55 | 29.0 | 3.07e-01 | 92.9% | 53.9% |
| 3226910 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.54 | 30.0 | 2.52e-01 | 95.3% | 30.5% |
| 3969140 | 607.1.1.1 ↗ | alpha arrays › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › PEP-utilisers_N | 0.53 | 38.0 | 3.96e-01 | 94.5% | 80.0% |
| 4438762 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.52 | 29.0 | 3.44e-01 | 98.4% | 80.0% |
| 3927287 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 34.0 | 3.64e-01 | 99.2% | 80.0% |
| 2780879 | 1172.1.1.1 ↗ | beta barrels › UL131A-like › UL130 C-terminal domain › UL130 C-terminal domain › Gp_UL130 | 0.51 | 28.0 | 2.94e-01 | 99.2% | 56.8% |
| 3638210 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.50 | 32.0 | 2.69e-01 | 89.0% | 39.0% |