←Back to structures
S75733.1__AAB32260.1__X__00003
Bact-VirS75733.1__AAB32260.1__X__00003
Identity
- Accession:
- S75733 ↗
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-82
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t57A02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.59 | 36.0 | 3.72e-01 | 75.6% | 64.0% |
| 3bujA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.59 | 52.0 | 3.33e-01 | 97.6% | 58.9% |
| 1z9eA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.54 | 31.0 | 3.16e-01 | 73.2% | 54.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3291651 | 532.1.1.1 ↗ | alpha arrays › Type III secretion system domain-like › Antibiotic binding domain of TipA-like multidrug resistance regulators › Antibiotic binding domain of TipA-like multidrug resistance regulators › TipAS | 0.56 | 38.0 | 3.44e-01 | 70.7% | 52.2% |
| 5034762 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.52 | 42.0 | 3.67e-01 | 92.7% | 60.7% |
| 3472114 | 192.21.1.0 ↗ | alpha bundles › Long alpha-hairpin › Slp2a Rab-binding domain-like › Slp2a Rab-binding domain-like | 0.50 | 37.0 | 3.39e-01 | 80.5% | 59.1% |
D2
medium
residues 92-131
Domain cluster:
representative
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3czpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.93 | 87.0 | 5.28e-01 | 100.0% | 24.9% |
| 2zttA00 | 6.10.140.720 | Special › Helix non-globular › Helix Hairpins › | 0.92 | 82.0 | 6.64e-01 | 100.0% | 54.8% |
| 4k6jB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.90 | 74.0 | 4.11e-01 | 90.0% | 7.6% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.90 | 74.0 | 6.40e-01 | 92.5% | 59.7% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.90 | 78.0 | 5.65e-01 | 100.0% | 36.4% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.89 | 78.0 | 6.02e-01 | 100.0% | 45.9% |
| 4flbA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.88 | 66.0 | 4.46e-01 | 82.5% | 24.4% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.88 | 77.0 | 5.58e-01 | 100.0% | 36.7% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.88 | 74.0 | 5.52e-01 | 100.0% | 39.4% |
| 1t7lB01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.87 | 78.0 | 4.42e-01 | 100.0% | 10.8% |
| 1zmbA02 | 6.10.170.10 | Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.85 | 69.0 | 7.17e-01 | 92.5% | 100.0% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.85 | 72.0 | 5.35e-01 | 100.0% | 38.1% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.85 | 73.0 | 5.28e-01 | 100.0% | 35.1% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 70.0 | 6.21e-01 | 100.0% | 68.3% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 70.0 | 5.77e-01 | 100.0% | 68.5% |
| 4in3B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.79 | 66.0 | 3.64e-01 | 100.0% | 6.8% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.79 | 67.0 | 6.15e-01 | 100.0% | 73.6% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 65.0 | 5.86e-01 | 100.0% | 68.3% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 61.0 | 5.27e-01 | 100.0% | 55.2% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 66.0 | 4.35e-01 | 100.0% | 24.4% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.77 | 65.0 | 3.92e-01 | 100.0% | 17.4% |
| 3qxzA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.77 | 64.0 | 5.70e-01 | 97.5% | 70.0% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 64.0 | 4.86e-01 | 100.0% | 52.9% |
| 3h0dB02 | 1.10.1200.150 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain | 0.76 | 64.0 | 5.12e-01 | 100.0% | 48.1% |
| 2y4tA02 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.76 | 60.0 | 5.48e-01 | 100.0% | 67.3% |
| 2p12A01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.75 | 61.0 | 4.17e-01 | 100.0% | 31.1% |
| 1wpbG01 | 1.10.287.680 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.75 | 55.0 | 5.08e-01 | 82.5% | 63.0% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.73 | 59.0 | 5.56e-01 | 95.0% | 76.0% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.73 | 56.0 | 4.73e-01 | 95.0% | 48.1% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.71 | 56.0 | 4.29e-01 | 100.0% | 51.8% |
| 3fp3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 56.0 | 4.08e-01 | 100.0% | 29.6% |
| 2hw5A02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.70 | 56.0 | 5.15e-01 | 97.5% | 68.4% |
| 1vbgA04 | 1.10.189.10 | Mainly Alpha › Orthogonal Bundle › Pyruvate Phosphate di-kinase; domain 2 › Pyruvate Phosphate Dikinase, domain 2 | 0.70 | 57.0 | 4.94e-01 | 95.0% | 58.7% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.70 | 54.0 | 4.42e-01 | 90.0% | 45.5% |
| 2qkdA02 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.70 | 61.0 | 4.17e-01 | 100.0% | 28.6% |
| 3bemB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.69 | 56.0 | 3.63e-01 | 100.0% | 41.1% |
| 2i7gB00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.69 | 57.0 | 3.32e-01 | 97.5% | 98.3% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.69 | 55.0 | 4.36e-01 | 90.0% | 65.9% |
| 3onqA01 | 1.20.5.5100 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 45.0 | 4.51e-01 | 80.0% | 66.7% |
| 7mwzD01 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.68 | 56.0 | 3.71e-01 | 97.5% | 80.0% |
| 3jc6D01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 54.0 | 3.70e-01 | 100.0% | 24.8% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.66 | 56.0 | 4.75e-01 | 97.5% | 78.8% |
| 4cpgA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 51.0 | 4.38e-01 | 97.5% | 56.5% |
| 1vfrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 46.0 | 3.06e-01 | 97.5% | 41.0% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 50.0 | 4.34e-01 | 100.0% | 89.6% |
| 3kxyT00 | 6.20.290.10 | Special › Other non-globular › Dna Ligase; domain 1 › | 0.53 | 38.0 | 3.41e-01 | 77.5% | 47.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3706056 | 604.22.1.0 ↗ | alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain | 0.98 | 91.0 | 6.87e-01 | 100.0% | 47.1% |
| 3735607 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.97 | 90.0 | 6.93e-01 | 100.0% | 50.0% |
| 3582379 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.97 | 89.0 | 7.26e-01 | 100.0% | 58.0% |
| 3731570 | 109.46.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) | 0.91 | 81.0 | 4.64e-01 | 100.0% | 11.6% |
| 4428645 | 3826.1.1.80 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GrpE | 0.91 | 82.0 | 7.12e-01 | 100.0% | 66.7% |
| 3805810 | 109.4.1.1425 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo84_C, PF27696 | 0.91 | 80.0 | 4.36e-01 | 100.0% | 7.1% |
| 3371804 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.89 | 77.0 | 4.57e-01 | 100.0% | 14.3% |
| 3387484 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.89 | 78.0 | 6.05e-01 | 100.0% | 47.1% |
| 3401022 | 101.1.9.144 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF28470 | 0.88 | 80.0 | 6.90e-01 | 100.0% | 71.7% |
| 4138735 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.88 | 76.0 | 5.66e-01 | 100.0% | 40.0% |
| 3691750 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.85 | 74.0 | 4.95e-01 | 100.0% | 26.8% |
| 4971062 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.85 | 73.0 | 5.75e-01 | 100.0% | 47.1% |
| 5058108 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.82 | 64.0 | 6.26e-01 | 90.0% | 80.0% |
| 3485513 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 64.0 | 4.22e-01 | 100.0% | 21.7% |
| 3229891 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.77 | 65.0 | 4.49e-01 | 100.0% | 28.1% |
| 3831 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.76 | 64.0 | 4.86e-01 | 100.0% | 52.9% |
| 5061333 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.76 | 63.0 | 5.82e-01 | 100.0% | 72.7% |
| 3988447 | 5043.1.1.0 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like | 0.76 | 63.0 | 5.80e-01 | 100.0% | 72.7% |
| 4005270 | 3718.1.1.15 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › COX4_pro | 0.75 | 61.0 | 4.83e-01 | 100.0% | 47.4% |
| 4012698 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 61.0 | 4.72e-01 | 100.0% | 40.0% |
| 4097490 | 3755.1.1.23 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CemA | 0.73 | 64.0 | 4.59e-01 | 100.0% | 34.8% |
| 4346136 | 605.1.1.108 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE | 0.72 | 56.0 | 4.93e-01 | 100.0% | 56.9% |
| 3589830 | 5043.2.1.8 ↗ | extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain › DUF5592 | 0.71 | 62.0 | 5.12e-01 | 97.5% | 64.3% |
| 3589232 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 55.0 | 3.21e-01 | 100.0% | 9.3% |
| 4615565 | 101.1.1.249 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SGIII | 0.71 | 59.0 | 4.69e-01 | 97.5% | 57.6% |
| 4358519 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.70 | 56.0 | 4.17e-01 | 90.0% | 35.0% |
| 4996648 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.70 | 57.0 | 3.93e-01 | 100.0% | 49.1% |
| None | — | 0.70 | 56.0 | 3.39e-01 | 90.0% | 14.0% | |
| 4473504 | 304.136.1.3 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SGIII | 0.70 | 58.0 | 4.55e-01 | 97.5% | 54.4% |
| 5034422 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.69 | 56.0 | 5.11e-01 | 92.5% | 89.1% |
| 5058438 | 192.28.1.0 ↗ | alpha bundles › Long alpha-hairpin › IDEAL domain › IDEAL domain | 0.67 | 58.0 | 5.47e-01 | 100.0% | 80.0% |
| 4637522 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.66 | 56.0 | 4.08e-01 | 97.5% | 34.8% |
| 3715873 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.64 | 54.0 | 4.83e-01 | 100.0% | 66.7% |