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SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00017
Bact-VirSCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00017
Identity
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-58
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6pxcA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.70 | 56.0 | 4.26e-01 | 100.0% | 45.2% |
| 4pe5B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 60.0 | 3.90e-01 | 100.0% | 22.9% |
| 3erbA02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.68 | 57.0 | 5.00e-01 | 100.0% | 68.3% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.66 | 53.0 | 3.51e-01 | 100.0% | 39.7% |
| 3t5oA03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.65 | 55.0 | 4.74e-01 | 100.0% | 64.5% |
| 6v06A04 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.65 | 53.0 | 4.67e-01 | 97.4% | 78.3% |
| 1ly2A02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.64 | 54.0 | 4.73e-01 | 100.0% | 71.2% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 49.0 | 4.62e-01 | 89.5% | 81.2% |
| 1md8A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.62 | 53.0 | 4.45e-01 | 100.0% | 61.8% |
| 3erbA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.62 | 51.0 | 4.53e-01 | 94.7% | 78.9% |
| 1ok3A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.62 | 51.0 | 4.44e-01 | 97.4% | 73.0% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 47.0 | 2.68e-01 | 100.0% | 7.7% |
| 2mm0A00 | 2.10.70.110 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.62 | 44.0 | 3.97e-01 | 94.7% | 51.6% |
| 6v06A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.62 | 54.0 | 4.63e-01 | 100.0% | 72.6% |
| 3o8eB01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.60 | 52.0 | 4.47e-01 | 100.0% | 69.4% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 3.45e-01 | 78.9% | 52.1% |
| 1q90C00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 44.0 | 3.28e-01 | 97.4% | 37.3% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 41.0 | 3.54e-01 | 89.5% | 70.3% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 42.0 | 3.65e-01 | 89.5% | 65.7% |
| 8cjvA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.56 | 46.0 | 4.26e-01 | 100.0% | 86.8% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 44.0 | 3.81e-01 | 94.7% | 65.7% |
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.54 | 38.0 | 3.89e-01 | 100.0% | 87.2% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 40.0 | 3.37e-01 | 94.7% | 59.7% |
| 1ecsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 36.0 | 2.78e-01 | 81.6% | 26.7% |
| 3klkA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.52 | 41.0 | 2.86e-01 | 100.0% | 87.0% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.52 | 39.0 | 3.63e-01 | 94.7% | 73.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 60.0 | 4.71e-01 | 100.0% | 81.2% |
| 3893051 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.70 | 51.0 | 5.22e-01 | 92.1% | 85.7% |
| 3908581 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.70 | 51.0 | 5.11e-01 | 92.1% | 77.5% |
| 598 | 4.1.1.68 ↗ | beta barrels › SH3 › SH3 › SH3 › YorP | 0.69 | 51.0 | 4.27e-01 | 84.2% | 62.0% |
| 3938042 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.67 | 52.0 | 4.84e-01 | 89.5% | 86.0% |
| 3915894 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.64 | 56.0 | 4.71e-01 | 100.0% | 72.3% |
| 3401480 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.62 | 54.0 | 4.43e-01 | 100.0% | 67.1% |
| 3791417 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.62 | 51.0 | 4.92e-01 | 97.4% | 84.4% |
| 3772962 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.62 | 54.0 | 4.67e-01 | 100.0% | 68.3% |
| 3274180 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 49.0 | 3.72e-01 | 100.0% | 41.8% |
| 3845472 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.62 | 53.0 | 4.43e-01 | 100.0% | 58.6% |
| 1487323 | 79.1.1.4 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › PhageP22-tail | 0.62 | 46.0 | 3.55e-01 | 100.0% | 35.0% |
| 3898203 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.61 | 52.0 | 4.25e-01 | 100.0% | 53.3% |
| 3572956 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.61 | 52.0 | 4.33e-01 | 100.0% | 68.6% |
| 3745210 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.60 | 52.0 | 4.64e-01 | 100.0% | 70.9% |
| 3918110 | 7528.1.1.5 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › AMG1_II | 0.60 | 47.0 | 3.48e-01 | 97.4% | 70.8% |
| 3840927 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.60 | 50.0 | 4.40e-01 | 100.0% | 73.3% |
| 3228053 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.60 | 48.0 | 4.41e-01 | 100.0% | 78.2% |
| 3893607 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.59 | 51.0 | 4.59e-01 | 100.0% | 70.9% |
| 5036655 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 43.0 | 3.92e-01 | 94.7% | 56.7% |
| 4904864 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.57 | 38.0 | 3.57e-01 | 73.7% | 52.9% |
| 3761120 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.54 | 42.0 | 3.70e-01 | 94.7% | 69.2% |
| 3764537 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.53 | 41.0 | 3.39e-01 | 94.7% | 55.0% |
| 3657897 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.52 | 36.0 | 3.15e-01 | 73.7% | 46.7% |
D2
high
residues 68-137
Domain cluster:
rep: FFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00046__D60-126