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SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00111
Bact-VirSCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00111
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-47_118-148
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.69 | 60.0 | 4.92e-01 | 94.9% | 94.2% |
| 2qggA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.60 | 42.0 | 4.04e-01 | 74.4% | 89.2% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 3.90e-01 | 71.8% | 78.8% |
| 1aalB00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.56 | 32.0 | 3.62e-01 | 71.8% | 73.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 4.29e-01 | 74.4% | 93.5% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 4.18e-01 | 74.4% | 96.6% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 30.0 | 3.25e-01 | 94.9% | 67.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4982797 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.75 | 67.0 | 5.38e-01 | 97.4% | 95.9% |
| 4940451 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.72 | 62.0 | 5.08e-01 | 92.3% | 96.3% |
| 5068098 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.61 | 44.0 | 3.45e-01 | 76.9% | 77.1% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.58 | 43.0 | 3.46e-01 | 79.5% | 60.6% |
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.56 | 40.0 | 3.44e-01 | 76.9% | 64.6% |
| 4203993 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.55 | 39.0 | 3.72e-01 | 75.6% | 88.4% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 38.0 | 3.54e-01 | 71.8% | 60.0% |
| 4452870 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.55 | 38.0 | 3.64e-01 | 71.8% | 90.0% |
| 5036542 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.55 | 42.0 | 3.10e-01 | 87.2% | 79.6% |
| 4441163 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.54 | 40.0 | 3.16e-01 | 80.8% | 73.1% |
| 4087903 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.54 | 39.0 | 3.74e-01 | 76.9% | 95.6% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.53 | 41.0 | 4.23e-01 | 89.7% | 89.3% |
| 3492016 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.52 | 38.0 | 3.65e-01 | 88.5% | 66.7% |
| 4438983 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 36.0 | 3.43e-01 | 74.4% | 64.2% |
| 3937478 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 39.0 | 3.55e-01 | 84.6% | 79.1% |
| 4968409 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.50 | 37.0 | 3.46e-01 | 80.8% | 98.0% |
D2
medium
residues 48-117_149-161
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.76 | 62.0 | 4.76e-01 | 88.0% | 62.4% |
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.74 | 61.0 | 4.68e-01 | 88.0% | 46.9% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.73 | 59.0 | 4.91e-01 | 88.0% | 55.2% |
| 6zgqA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.71 | 58.0 | 4.80e-01 | 89.2% | 57.8% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.68 | 57.0 | 4.71e-01 | 88.0% | 53.6% |
| 2zplB00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 40.0 | 3.87e-01 | 78.3% | 74.5% |
| 4c2dA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 40.0 | 3.95e-01 | 80.7% | 100.0% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 3.62e-01 | 79.5% | 94.0% |
| 5xgbA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 38.0 | 3.45e-01 | 74.7% | 78.0% |
| 4mveA00 | 2.40.128.580 | Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain | 0.54 | 38.0 | 3.25e-01 | 75.9% | 75.5% |
| 2ky9A02 | 2.40.10.520 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 38.0 | 4.17e-01 | 83.1% | 100.0% |
| 3lidA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 37.0 | 3.18e-01 | 75.9% | 83.6% |
| 2k31A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 34.0 | 2.89e-01 | 71.1% | 64.4% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 34.0 | 3.48e-01 | 71.1% | 86.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4983616 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.77 | 61.0 | 4.79e-01 | 84.3% | 44.1% |
| 4993927 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.75 | 62.0 | 5.01e-01 | 88.0% | 64.7% |
| 3517362 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.74 | 57.0 | 4.72e-01 | 84.3% | 47.2% |
| 4070999 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.73 | 60.0 | 4.82e-01 | 88.0% | 51.6% |
| 4996523 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.73 | 60.0 | 4.49e-01 | 89.2% | 68.0% |
| 5028788 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.70 | 58.0 | 4.81e-01 | 88.0% | 55.0% |
| 3484132 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 42.0 | 3.41e-01 | 77.1% | 70.3% |
| 3278435 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.55 | 42.0 | 3.95e-01 | 83.1% | 96.2% |
| 3576888 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 41.0 | 3.56e-01 | 81.9% | 53.8% |
| 4030461 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.53 | 41.0 | 3.32e-01 | 84.3% | 72.1% |
| 5013679 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.53 | 39.0 | 3.61e-01 | 79.5% | 100.0% |
| 3833687 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 40.0 | 3.43e-01 | 84.3% | 82.1% |
| 3824832 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 37.0 | 2.59e-01 | 75.9% | 42.5% |
| 3690350 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 38.0 | 3.42e-01 | 81.9% | 85.0% |