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SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00146
Bact-VirSCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00146
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-74
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4953755_prodigal-single.1__X__X__00144__D16-64
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6a95B00 | 2.30.130.120 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.76 | 44.0 | 4.72e-01 | 89.4% | 67.9% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.67 | 50.0 | 4.47e-01 | 92.4% | 56.2% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 53.0 | 4.58e-01 | 97.0% | 91.1% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 50.0 | 4.34e-01 | 90.9% | 94.6% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 51.0 | 4.46e-01 | 90.9% | 93.1% |
| 1b7eA01 | 3.90.350.10 | Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 | 0.61 | 43.0 | 2.96e-01 | 90.9% | 20.3% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 49.0 | 4.20e-01 | 92.4% | 90.0% |
| 1vwxd00 | 3.10.440.10 | Alpha Beta › Roll › Ribosomal Protein L31e; Chain: W; › Ribosomal protein L31 | 0.60 | 50.0 | 4.30e-01 | 93.9% | 87.9% |
| 1pfoA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.59 | 38.0 | 4.17e-01 | 95.5% | 84.9% |
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 47.0 | 3.77e-01 | 97.0% | 82.5% |
| 3m4pA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 4.12e-01 | 95.5% | 80.4% |
| 3rtyB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 43.0 | 3.70e-01 | 95.5% | 50.5% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.55 | 44.0 | 4.09e-01 | 90.9% | 96.6% |
| 1usuB00 | 3.15.10.20 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Activator of Hsp90 ATPase Aha1, N-terminal domain | 0.55 | 37.0 | 2.95e-01 | 95.5% | 34.1% |
| 4m4xA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 42.0 | 3.49e-01 | 93.9% | 47.6% |
| 2k50A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 42.0 | 3.74e-01 | 92.4% | 85.6% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 42.0 | 3.67e-01 | 93.9% | 88.3% |
| 2gf6A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 42.0 | 3.45e-01 | 93.9% | 75.2% |
| 2yzcA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.52 | 45.0 | 2.98e-01 | 100.0% | 48.8% |
| 4pqxA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.51 | 39.0 | 3.89e-01 | 87.9% | 100.0% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.51 | 43.0 | 3.47e-01 | 100.0% | 64.1% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.51 | 35.0 | 3.20e-01 | 78.8% | 50.5% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035945 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.72 | 61.0 | 5.13e-01 | 95.5% | 80.0% |
| 3968190 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 58.0 | 5.10e-01 | 89.4% | 100.0% |
| 5037168 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.68 | 57.0 | 4.68e-01 | 95.5% | 86.4% |
| 3604100 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 57.0 | 4.14e-01 | 95.5% | 55.6% |
| 5052151 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.67 | 57.0 | 4.81e-01 | 97.0% | 81.7% |
| 5000768 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.67 | 56.0 | 4.77e-01 | 97.0% | 85.2% |
| 5015768 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 55.0 | 4.91e-01 | 95.5% | 87.0% |
| 4029582 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.66 | 56.0 | 4.73e-01 | 97.0% | 88.7% |
| 5060038 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.66 | 56.0 | 4.72e-01 | 97.0% | 80.0% |
| 3741507 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.66 | 52.0 | 4.57e-01 | 87.9% | 95.0% |
| 3702518 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 52.0 | 4.42e-01 | 87.9% | 95.5% |
| 4296288 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.65 | 50.0 | 4.40e-01 | 86.4% | 94.3% |
| 5003898 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.65 | 54.0 | 4.58e-01 | 95.5% | 87.8% |
| 3215667 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.64 | 51.0 | 4.32e-01 | 90.9% | 87.5% |
| 2035523 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.63 | 51.0 | 4.37e-01 | 90.9% | 92.0% |
| 3814285 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.63 | 48.0 | 4.19e-01 | 87.9% | 88.2% |
| 3703275 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 49.0 | 4.18e-01 | 89.4% | 94.8% |
| 3995685 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.62 | 49.0 | 4.27e-01 | 90.9% | 93.6% |
| 4930094 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.61 | 52.0 | 4.48e-01 | 97.0% | 85.7% |
| 1758564 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.60 | 46.0 | 3.50e-01 | 98.5% | 32.8% |
| 3839607 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.60 | 48.0 | 4.06e-01 | 92.4% | 88.1% |
| 4944381 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.56 | 48.0 | 3.68e-01 | 97.0% | 98.7% |
| 3300937 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.56 | 44.0 | 2.77e-01 | 89.4% | 19.2% |
| 3322969 | 213.1.1.86 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › PF31063 | 0.55 | 45.0 | 3.44e-01 | 97.0% | 61.0% |
| 3492991 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.55 | 44.0 | 3.54e-01 | 97.0% | 44.0% |
| 3994973 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.54 | 39.0 | 3.18e-01 | 92.4% | 39.2% |
| 4084869 | 213.1.1.14 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_16 | 0.52 | 38.0 | 2.80e-01 | 90.9% | 29.1% |
| 3669780 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.52 | 43.0 | 2.68e-01 | 97.0% | 28.7% |
| 3637448 | 220.1.1.9 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs | 0.51 | 43.0 | 3.22e-01 | 95.5% | 37.8% |
| 3722378 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 41.0 | 3.75e-01 | 87.9% | 98.9% |
| 3997968 | 5.1.5.128 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NUP159_NUP214 | 0.51 | 41.0 | 2.78e-01 | 93.9% | 22.9% |
| 3965228 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 40.0 | 3.68e-01 | 93.9% | 100.0% |
| 3669519 | 2.1.1.105 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NMD3_OB | 0.50 | 37.0 | 3.40e-01 | 83.3% | 100.0% |