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SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00165

Bact-Vir

SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00165

Identity

Kingdom:
phage

Quality

95.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-71
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.77 58.0 4.45e-01 98.5% 36.9%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 48.0 5.03e-01 93.8% 76.7%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 48.0 5.32e-01 93.8% 92.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.70 44.0 5.14e-01 81.5% 91.3%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.69 63.0 4.29e-01 98.5% 30.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 46.0 5.07e-01 95.4% 90.4%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 45.0 5.04e-01 92.3% 93.8%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 43.0 4.81e-01 81.5% 89.6%
3ervA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 59.0 4.13e-01 98.5% 39.5%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 59.0 3.58e-01 98.5% 25.4%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 48.0 5.03e-01 95.4% 85.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 4.76e-01 92.3% 77.8%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.79e-01 92.3% 83.9%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 44.0 4.36e-01 83.1% 67.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.58e-01 100.0% 71.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 4.61e-01 93.8% 75.8%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 46.0 4.95e-01 95.4% 92.6%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.63 40.0 2.81e-01 73.8% 21.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.55e-01 100.0% 76.6%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 45.0 4.95e-01 92.3% 98.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 4.69e-01 98.5% 70.2%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.62 55.0 3.82e-01 100.0% 48.1%
3e29B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 45.0 3.61e-01 78.5% 97.8%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.62 47.0 4.08e-01 100.0% 54.1%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.61 53.0 3.85e-01 98.5% 41.1%
2fujA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 45.0 3.70e-01 80.0% 94.1%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 47.0 4.93e-01 98.5% 98.2%
1q4tA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 43.0 3.41e-01 80.0% 73.2%
4ybvA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 43.0 3.57e-01 80.0% 86.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.49e-01 98.5% 83.1%
3s4kA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 42.0 3.45e-01 80.0% 84.7%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 42.0 3.50e-01 80.0% 62.6%
1wjsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 50.0 4.01e-01 100.0% 63.0%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 43.0 2.79e-01 98.5% 16.8%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.64e-01 100.0% 69.9%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.55 45.0 4.06e-01 95.4% 95.7%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 47.0 4.13e-01 100.0% 78.1%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.53 39.0 3.21e-01 81.5% 44.9%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.53 41.0 3.65e-01 87.7% 62.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 46.0 4.62e-01 100.0% 95.6%
3dlbA04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 36.0 2.82e-01 76.9% 85.7%
5eo4A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 44.0 3.49e-01 96.9% 98.6%
3ck1A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 43.0 3.43e-01 96.9% 95.8%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.51 42.0 3.08e-01 95.4% 83.1%
2xanA01 3.30.200.110 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe 0.51 41.0 3.24e-01 90.8% 74.8%
1a41A01 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.51 43.0 3.53e-01 98.5% 61.4%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 41.0 2.67e-01 100.0% 89.5%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.50 42.0 3.44e-01 98.5% 95.5%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.50 38.0 3.06e-01 83.1% 69.6%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3996279 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.70 53.0 4.94e-01 95.4% 66.3%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.34e-01 92.3% 89.1%
3931805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 47.0 5.28e-01 86.2% 94.0%
3625264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 51.0 4.50e-01 100.0% 55.8%
4015238 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.67 49.0 4.00e-01 98.5% 41.6%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 48.0 5.02e-01 95.4% 83.3%
5056599 219.1.1.51 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.66 58.0 4.38e-01 98.5% 41.3%
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.66 52.0 5.08e-01 93.8% 78.6%
5039793 219.1.1.77 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 0.65 59.0 4.07e-01 98.5% 33.2%
3615365 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.65 58.0 3.96e-01 98.5% 31.7%
3217770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 50.0 4.31e-01 93.8% 53.0%
3486329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.93e-01 93.8% 80.0%
5061293 219.1.1.77 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 0.65 58.0 3.97e-01 98.5% 31.2%
3599666 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.65 58.0 3.49e-01 98.5% 17.5%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 47.0 4.78e-01 98.5% 78.5%
3575865 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.64 48.0 4.70e-01 93.8% 74.3%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 53.0 5.05e-01 100.0% 81.3%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.70e-01 100.0% 81.2%
3933047 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.62 46.0 3.41e-01 93.8% 31.9%
1391581 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.62 44.0 3.92e-01 93.8% 52.7%
3712782 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.34e-01 96.9% 65.0%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.98e-01 100.0% 81.3%
5018860 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.61 54.0 4.13e-01 98.5% 46.0%
3941170 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.61 48.0 4.68e-01 92.3% 78.6%
5077969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.25e-01 92.3% 65.0%
3244497 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.60 45.0 3.43e-01 93.8% 34.7%
3339169 4.1.1.415 ↗ beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.60 46.0 4.26e-01 95.4% 63.5%
3924375 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.60 49.0 4.68e-01 95.4% 77.3%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 53.0 4.71e-01 100.0% 80.0%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 54.0 5.02e-01 100.0% 95.0%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 48.0 4.82e-01 95.4% 87.7%
3999725 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.22e-01 100.0% 63.5%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.44e-01 93.8% 75.7%
3845425 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 46.0 4.14e-01 100.0% 61.1%
3377696 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.59 45.0 3.15e-01 81.5% 34.5%
3736175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.01e-01 93.8% 61.2%
3700770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.73e-01 100.0% 93.3%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 44.0 4.35e-01 100.0% 77.1%
3930014 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.58 44.0 3.31e-01 86.2% 32.5%
5037849 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.58 46.0 3.79e-01 89.2% 72.0%
4278184 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.58 47.0 4.46e-01 95.4% 73.8%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 52.0 3.59e-01 100.0% 37.2%
3587906 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.58 48.0 4.56e-01 98.5% 77.5%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.61e-01 95.4% 89.1%
3890336 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.57 50.0 3.29e-01 98.5% 28.4%
3727760 219.1.1.129 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF7770 0.57 50.0 3.99e-01 100.0% 81.5%
3691196 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.57 45.0 3.02e-01 89.2% 96.8%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 51.0 3.50e-01 100.0% 35.6%
3457106 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 45.0 4.55e-01 100.0% 89.2%
3838036 4071.1.1.1 ↗ beta barrels › BH3618-like › BH3618-like › BH3618-like › FliW 0.57 47.0 3.83e-01 95.4% 79.2%
3601070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 48.0 4.81e-01 93.8% 92.3%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.56 46.0 3.59e-01 93.8% 43.0%
3494683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.41e-01 95.4% 81.4%
3576219 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.55 49.0 3.81e-01 100.0% 64.1%
3774803 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.55 48.0 3.01e-01 98.5% 21.7%
3709279 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 48.0 4.37e-01 100.0% 72.2%
2526324 7086.1.1.0 ↗ 0.54 39.0 3.48e-01 78.5% 68.4%
4426276 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 41.0 4.06e-01 93.8% 81.4%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 45.0 4.06e-01 100.0% 89.5%
3615787 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.53 40.0 2.76e-01 81.5% 31.6%
3786518 4.8.1.18 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N 0.52 38.0 3.86e-01 87.7% 80.0%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 47.0 4.27e-01 100.0% 83.5%
5063188 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.52 40.0 2.84e-01 86.2% 35.8%
3737837 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 41.0 4.18e-01 92.3% 95.4%
3742423 5.1.4.31 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C 0.51 42.0 2.40e-01 100.0% 43.2%
3490456 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.38e-01 98.5% 57.9%
3721314 219.1.1.93 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.51 45.0 3.71e-01 100.0% 100.0%
2841854 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.50 38.0 3.15e-01 86.2% 68.2%