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SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00262

Bact-Vir

SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00262

Identity

Kingdom:
phage

Quality

79.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-88
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.60 38.0 3.94e-01 100.0% 67.1%
2vldB01 2.70.180.20 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › 0.60 46.0 4.20e-01 100.0% 61.0%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 4.20e-01 100.0% 66.4%
2c43A02 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.57 46.0 4.11e-01 89.7% 88.8%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.57 38.0 3.33e-01 92.0% 43.6%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.54 45.0 4.28e-01 100.0% 77.9%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 3.84e-01 83.9% 100.0%
2j3tC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 43.0 3.73e-01 92.0% 88.7%
2hnkA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 41.0 3.11e-01 87.4% 93.9%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 47.0 4.29e-01 100.0% 80.2%
1h8mA00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.52 43.0 3.72e-01 93.1% 82.9%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 44.0 3.16e-01 95.4% 89.6%
3cueC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 42.0 3.66e-01 92.0% 88.8%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.52 33.0 3.61e-01 90.8% 83.6%
1w63Q00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 42.0 3.62e-01 93.1% 75.0%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.51 41.0 3.72e-01 92.0% 89.1%
2j3wC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 42.0 3.67e-01 93.1% 84.4%
7ewsB02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.50 41.0 3.00e-01 90.8% 59.6%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 32.0 2.95e-01 100.0% 45.8%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3235400 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.63 47.0 4.72e-01 100.0% 77.5%
3172569 220.1.1.245 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29445 0.58 44.0 3.86e-01 100.0% 52.6%
3232810 220.1.1.49 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.58 45.0 3.78e-01 100.0% 47.7%
3166618 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.57 47.0 3.86e-01 90.8% 89.9%
3272511 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.55 45.0 3.88e-01 90.8% 89.3%
3600795 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 45.0 3.86e-01 92.0% 91.7%
3715965 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.54 44.0 3.76e-01 90.8% 88.7%
3737473 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.54 45.0 3.74e-01 92.0% 89.7%
3701193 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.54 44.0 3.80e-01 92.0% 86.1%
3594372 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 43.0 2.69e-01 92.0% 49.8%
3574392 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 48.0 4.29e-01 100.0% 71.7%
3704074 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.53 43.0 3.60e-01 92.0% 84.2%
3900377 220.1.1.41 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Sharpin_PH 0.53 48.0 4.22e-01 100.0% 71.2%
3527821 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.52 43.0 3.65e-01 92.0% 82.0%
4200316 220.1.1.191 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28624 0.52 47.0 3.88e-01 100.0% 65.2%
3291210 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.52 45.0 3.90e-01 100.0% 72.4%
3278684 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.51 45.0 4.09e-01 100.0% 83.3%
5052141 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 41.0 3.53e-01 90.8% 82.7%
5053041 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 42.0 3.67e-01 92.0% 85.9%
3507450 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.51 37.0 3.34e-01 78.2% 76.0%
3231336 223.2.1.9 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.51 42.0 3.69e-01 94.3% 88.9%