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SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00372
Bact-VirSCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00372
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-59
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zqcA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 41.0 | 3.83e-01 | 70.0% | 70.3% |
| 5lohA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.60 | 42.0 | 2.91e-01 | 74.0% | 92.0% |
| 3bhnA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.59 | 42.0 | 2.82e-01 | 76.0% | 37.6% |
| 2e5aA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 42.0 | 2.76e-01 | 96.0% | 16.5% |
| 1afwB01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 49.0 | 3.29e-01 | 96.0% | 30.0% |
| 4x0qA04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.57 | 41.0 | 2.96e-01 | 78.0% | 28.5% |
| 1iqzA00 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 34.0 | 2.95e-01 | 90.0% | 38.3% |
| 4ht4A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.54 | 37.0 | 2.54e-01 | 96.0% | 19.1% |
| 4hzuS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.54 | 45.0 | 3.26e-01 | 100.0% | 94.5% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 3.55e-01 | 86.0% | 72.5% |
| 1qoyA00 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.52 | 41.0 | 2.62e-01 | 92.0% | 16.2% |
| 4r78A02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.52 | 39.0 | 2.82e-01 | 92.0% | 78.0% |
| 2vx7A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 43.0 | 2.64e-01 | 98.0% | 28.1% |
| 2ci9B00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 37.0 | 3.09e-01 | 80.0% | 87.0% |
| 1l5aA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 39.0 | 2.83e-01 | 96.0% | 33.5% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.51 | 36.0 | 2.68e-01 | 78.0% | 27.8% |
| 3sigA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 40.0 | 2.64e-01 | 96.0% | 29.1% |
| 6ks6A02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.51 | 42.0 | 3.42e-01 | 100.0% | 72.2% |
| 3f5dA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.50 | 39.0 | 2.77e-01 | 92.0% | 60.1% |
| 1xw8A00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.50 | 41.0 | 2.76e-01 | 98.0% | 59.8% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 40.0 | 3.06e-01 | 92.0% | 48.5% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 41.0 | 3.66e-01 | 94.0% | 76.7% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036196 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.63 | 44.0 | 2.86e-01 | 76.0% | 21.6% |
| 3609675 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 3.87e-01 | 90.0% | 51.8% |
| 1138908 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.61 | 44.0 | 2.75e-01 | 78.0% | 63.5% |
| 3595356 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.59 | 43.0 | 3.25e-01 | 78.0% | 43.2% |
| 3756527 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.59 | 44.0 | 3.82e-01 | 82.0% | 82.4% |
| 3704770 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.58 | 44.0 | 3.31e-01 | 82.0% | 46.2% |
| 3654151 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.58 | 42.0 | 3.07e-01 | 82.0% | 33.9% |
| 3855507 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 46.0 | 3.48e-01 | 94.0% | 49.6% |
| 3232719 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.57 | 46.0 | 3.03e-01 | 100.0% | 87.7% |
| 3423772 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.57 | 41.0 | 3.31e-01 | 82.0% | 46.1% |
| 3605468 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.56 | 49.0 | 3.22e-01 | 100.0% | 48.0% |
| 3277186 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.56 | 41.0 | 3.14e-01 | 80.0% | 45.6% |
| 4301644 | 101.19.1.0 ↗ | alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN | 0.55 | 45.0 | 3.95e-01 | 94.0% | 73.8% |
| 3969341 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.55 | 41.0 | 3.19e-01 | 82.0% | 45.6% |
| 4217329 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.55 | 39.0 | 3.07e-01 | 78.0% | 44.2% |
| 3733163 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.54 | 45.0 | 2.73e-01 | 100.0% | 35.7% |
| 4507224 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.54 | 46.0 | 2.91e-01 | 98.0% | 50.5% |
| 3583884 | 109.4.1.570 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps8 | 0.54 | 42.0 | 2.37e-01 | 94.0% | 14.3% |
| 3733040 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.53 | 42.0 | 3.47e-01 | 88.0% | 48.9% |
| 3488729 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.52 | 44.0 | 2.91e-01 | 96.0% | 37.2% |
| 4497605 | 2003.1.5.54 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 | 0.51 | 41.0 | 2.63e-01 | 98.0% | 26.6% |
| 3768377 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 37.0 | 2.91e-01 | 80.0% | 73.3% |
| 3617633 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 2.42e-01 | 98.0% | 25.0% |
| 2601919 | 7529.1.1.5 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PARG_cat_microb | 0.51 | 40.0 | 2.64e-01 | 96.0% | 29.1% |
| 3370099 | 212.1.1.10 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › RNase_PH | 0.51 | 37.0 | 2.77e-01 | 78.0% | 49.6% |
| 3173752 | 2002.1.1.192 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase | 0.51 | 43.0 | 2.45e-01 | 100.0% | 36.8% |
| 3783032 | 109.4.1.2695 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_ELP1, HB_ELP1 | 0.51 | 42.0 | 2.64e-01 | 98.0% | 17.3% |
| 3396172 | 633.7.1.0 ↗ | alpha bundles › Bromodomain-like › Bacillus cereus metalloprotein-like › Bacillus cereus metalloprotein-like | 0.50 | 39.0 | 2.70e-01 | 86.0% | 58.9% |
| 2754401 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.50 | 36.0 | 2.11e-01 | 88.0% | 43.2% |
| 3927639 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 39.0 | 2.35e-01 | 88.0% | 33.5% |
| 4486611 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.50 | 42.0 | 3.04e-01 | 98.0% | 74.7% |