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SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00376
Bact-VirSCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00376
Identity
- Kingdom:
- phage
Quality
68.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-64_121-134
D2
medium
residues 65-120
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1te2A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.74 | 66.0 | 6.09e-01 | 100.0% | 94.4% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.71 | 62.0 | 5.48e-01 | 100.0% | 98.8% |
| 3c2gA02 | 1.10.10.1630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like | 0.69 | 33.0 | 3.12e-01 | 83.9% | 38.2% |
| 4b4yA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.66 | 57.0 | 4.26e-01 | 100.0% | 67.8% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 38.0 | 3.90e-01 | 94.6% | 64.2% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 39.0 | 3.84e-01 | 100.0% | 61.0% |
| 3ihmA03 | 6.10.250.650 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 45.0 | 4.70e-01 | 80.4% | 100.0% |
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.59 | 40.0 | 3.59e-01 | 96.4% | 50.6% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 50.0 | 4.01e-01 | 100.0% | 89.8% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 44.0 | 3.68e-01 | 85.7% | 47.9% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.57 | 42.0 | 3.10e-01 | 80.4% | 100.0% |
| 4huqS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.56 | 52.0 | 3.60e-01 | 100.0% | 34.1% |
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.56 | 39.0 | 3.75e-01 | 92.9% | 63.1% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 40.0 | 3.03e-01 | 76.8% | 79.7% |
| 2oyyA00 | 6.10.80.10 | Special › Helix non-globular › DNA polymerase; domain 1 › Hexameric tyrosine-coordinated heme protein (HTHP) | 0.54 | 47.0 | 4.37e-01 | 100.0% | 78.9% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.53 | 37.0 | 3.48e-01 | 100.0% | 59.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.51 | 35.0 | 3.25e-01 | 100.0% | 54.7% |
| 4m52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 38.0 | 2.64e-01 | 85.7% | 93.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3825757 | 101.35.1.23 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate | 0.67 | 42.0 | 3.98e-01 | 87.5% | 55.4% |
| 3481299 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.63 | 40.0 | 3.88e-01 | 100.0% | 56.9% |
| 3885007 | 3922.1.1.67 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Val_tRNA-synt_C | 0.60 | 41.0 | 3.81e-01 | 100.0% | 57.1% |
| 4025391 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.54 | 37.0 | 3.37e-01 | 75.0% | 81.2% |
| 3799245 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 44.0 | 2.72e-01 | 94.6% | 69.9% |
| 4026843 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.52 | 45.0 | 4.27e-01 | 100.0% | 80.0% |
| 4164723 | 101.1.2.598 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, POLR3C_WHD | 0.51 | 41.0 | 2.50e-01 | 96.4% | 98.9% |