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SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00045

Bact-Vir

SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00045

Identity

Kingdom:
phage

Quality

84.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-178
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.69 52.0 5.74e-01 93.6% 96.4%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.69 45.0 5.39e-01 92.5% 99.1%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 40.0 4.92e-01 81.5% 100.0%
1dowA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.64 44.0 4.19e-01 90.2% 58.5%
1qkrB00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.64 47.0 4.70e-01 87.9% 72.8%
2qkwA00 1.20.1270.140 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AvrPto 0.63 37.0 4.79e-01 74.0% 100.0%
3c18A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.63 41.0 4.95e-01 93.6% 96.6%
2gnoA03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.63 35.0 4.49e-01 87.9% 93.0%
1h6gA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.63 44.0 5.14e-01 83.2% 100.0%
2pfdA03 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.62 42.0 4.03e-01 76.3% 58.1%
1z23A00 1.20.120.830 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain 0.61 52.0 5.37e-01 90.8% 96.9%
2qr4A01 1.20.140.70 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain 0.61 44.0 4.60e-01 78.0% 80.1%
4rm7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 34.0 3.78e-01 75.7% 66.9%
3vw7A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.61 51.0 4.30e-01 89.0% 84.4%
2hsbA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.61 42.0 4.86e-01 87.9% 96.8%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.60 35.0 4.32e-01 78.0% 91.5%
1io1A01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.60 49.0 5.03e-01 93.6% 88.8%
2kbbA00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.60 49.0 4.94e-01 100.0% 86.2%
1o3uA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.60 41.0 4.79e-01 89.6% 100.0%
2rgnB01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.59 43.0 4.10e-01 75.1% 90.2%
5d91A02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.59 42.0 4.01e-01 90.2% 62.6%
2d4uB00 1.20.120.30 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain 0.59 47.0 4.99e-01 91.9% 95.5%
4cbeA00 1.20.120.1640 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 50.0 4.67e-01 91.9% 100.0%
1v9dB00 1.20.58.2220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain 0.57 43.0 3.54e-01 78.0% 59.2%
7csoA01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.56 41.0 3.77e-01 74.0% 86.8%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 31.0 4.07e-01 72.3% 100.0%
4cgkA01 6.10.250.3150 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.56 40.0 3.72e-01 72.8% 88.8%
1x46A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 29.0 3.08e-01 98.3% 57.3%
2ap3A00 1.20.120.570 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like 0.54 46.0 4.47e-01 90.8% 91.7%
3l39A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.54 39.0 3.73e-01 87.9% 64.0%
4nqfA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.53 43.0 4.65e-01 93.6% 100.0%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.52 31.0 3.95e-01 80.3% 99.0%
2cmrA00 1.20.58.1860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 42.0 4.11e-01 89.6% 79.2%
1s0pA01 1.25.40.330 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Adenylate cyclase-associated CAP, N-terminal domain 0.51 34.0 3.50e-01 87.3% 67.8%
3g5uA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.50 45.0 3.06e-01 100.0% 67.7%
2r31A02 1.10.3580.10 Mainly Alpha › Orthogonal Bundle › ATP12-like fold › ATP12 ATPase 0.50 37.0 3.77e-01 76.3% 81.2%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3565707 601.11.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Perilipin 0.67 55.0 5.37e-01 96.0% 79.5%
3230744 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.65 49.0 5.40e-01 89.0% 96.4%
3899721 174.1.1.43 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.64 41.0 4.18e-01 72.8% 65.5%
3949626 5069.1.1.15 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm 0.63 50.0 5.31e-01 90.2% 93.5%
3873872 633.21.1.23 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.62 40.0 4.04e-01 72.3% 64.1%
5005799 5069.1.1.15 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm 0.62 48.0 4.54e-01 93.6% 67.6%
3953156 601.3.1.5 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Alpha-E 0.61 52.0 5.30e-01 91.9% 97.6%
3875142 601.11.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Perilipin 0.60 55.0 4.97e-01 98.3% 82.2%
3617744 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.60 36.0 3.90e-01 70.5% 68.0%
4948130 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.59 45.0 5.01e-01 93.6% 100.0%
3279912 192.29.1.52 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Anthrone_oxy 0.59 49.0 5.10e-01 89.6% 98.2%
3815650 604.1.1.134 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28715 0.57 43.0 4.07e-01 76.9% 66.8%
3907025 604.1.1.92 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 0.57 43.0 4.70e-01 78.0% 93.8%
3528012 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.57 42.0 3.82e-01 74.0% 76.9%
3179076 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.57 40.0 4.50e-01 71.1% 96.9%
4516566 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.57 37.0 3.63e-01 93.6% 60.0%
3357058 109.3.1.40 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PGG 0.57 38.0 4.14e-01 90.2% 80.7%
3642615 109.4.1.297 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_EMC2 0.57 26.0 2.89e-01 71.1% 50.4%
3221003 601.54.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 0.56 37.0 3.87e-01 79.8% 72.3%
3504805 3291.1.1.1 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.55 33.0 3.61e-01 72.8% 71.4%
4389816 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.55 50.0 3.35e-01 100.0% 63.9%
5007128 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.54 40.0 3.12e-01 93.1% 37.1%
3983005 635.1.1.1 ↗ alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 0.54 43.0 4.31e-01 95.4% 81.7%
3220199 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.54 32.0 3.41e-01 72.3% 65.2%
3761039 603.1.1.97 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.53 42.0 3.74e-01 100.0% 58.4%
3494756 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.53 44.0 4.61e-01 87.3% 94.4%
3246395 603.1.1.1 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.52 39.0 3.70e-01 76.3% 78.5%
3637309 4323.1.1.0 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.52 43.0 4.18e-01 87.3% 78.9%
3969687 3755.3.1.461 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › MksF 0.52 46.0 3.99e-01 94.8% 95.8%
4559671 2004.1.1.567 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 0.52 40.0 2.59e-01 80.3% 28.7%
3663533 109.4.1.202 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.50 27.0 2.63e-01 90.2% 46.8%
3694080 3758.1.1.0 ↗ alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins 0.50 46.0 3.67e-01 99.4% 91.5%
3682214 109.4.1.1414 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TTI1_C 0.50 45.0 3.41e-01 98.8% 50.2%
3240814 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.50 37.0 3.78e-01 76.9% 81.8%
D2 medium residues 182-314_396-428
PDB
D3 medium residues 315-384
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.79 58.0 6.46e-01 77.1% 100.0%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 53.0 5.14e-01 75.7% 78.9%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.72 54.0 5.31e-01 78.6% 97.3%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.85e-01 82.9% 96.6%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 5.21e-01 72.9% 78.5%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 48.0 5.09e-01 70.0% 90.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.55e-01 81.4% 91.5%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.70 57.0 4.42e-01 87.1% 60.0%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 4.93e-01 85.7% 62.0%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 55.0 5.53e-01 87.1% 91.4%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 5.59e-01 88.6% 90.3%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 46.0 4.95e-01 70.0% 95.1%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 5.04e-01 75.7% 86.7%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 5.21e-01 85.7% 86.7%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.48e-01 87.1% 95.2%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 5.56e-01 85.7% 95.2%
1sp4B00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 53.0 3.82e-01 88.6% 43.9%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 5.59e-01 90.0% 96.8%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.66 46.0 4.31e-01 72.9% 86.0%
3a46A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.65 57.0 4.59e-01 98.6% 82.4%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 4.40e-01 71.4% 97.2%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 5.01e-01 85.7% 91.8%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 5.27e-01 87.1% 88.4%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 3.98e-01 87.1% 44.4%
3iutA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 51.0 3.63e-01 88.6% 40.5%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.88e-01 88.6% 87.7%
3al9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 51.0 3.09e-01 88.6% 32.0%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 4.75e-01 94.3% 81.8%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.63 55.0 4.78e-01 100.0% 81.7%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.62 48.0 3.55e-01 84.3% 35.6%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.61 52.0 4.62e-01 97.1% 100.0%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 52.0 3.20e-01 97.1% 29.5%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 42.0 3.26e-01 74.3% 64.3%
3lppA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.60 42.0 2.91e-01 72.9% 41.8%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 49.0 4.26e-01 91.4% 80.7%
2k3dA00 3.10.450.130 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains 0.59 47.0 4.41e-01 87.1% 92.0%
2arhA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 50.0 3.91e-01 95.7% 100.0%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 52.0 4.11e-01 100.0% 92.6%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.58 47.0 4.25e-01 92.9% 65.3%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.58 48.0 3.43e-01 91.4% 89.6%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 3.43e-01 74.3% 78.9%
2wzoA01 3.30.160.360 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 46.0 3.85e-01 92.9% 69.2%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.56 42.0 2.72e-01 82.9% 22.1%
4l1nA00 2.40.128.660 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 0.54 40.0 3.18e-01 81.4% 52.8%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 43.0 2.85e-01 87.1% 36.3%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 39.0 3.34e-01 80.0% 100.0%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 40.0 2.70e-01 81.4% 21.6%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 46.0 3.11e-01 100.0% 56.3%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 40.0 2.67e-01 81.4% 21.3%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 41.0 2.81e-01 87.1% 37.1%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 38.0 2.69e-01 80.0% 39.6%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 35.0 3.65e-01 72.9% 86.2%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 41.0 2.77e-01 87.1% 37.8%
1cwvA04 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 3.55e-01 81.4% 78.0%
2i7tA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 36.0 2.55e-01 78.6% 38.5%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3230533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 48.0 5.73e-01 82.9% 100.0%
3622139 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 56.0 5.11e-01 77.1% 61.1%
3786518 4.8.1.18 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N 0.76 58.0 6.00e-01 81.4% 100.0%
3214131 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 54.0 5.23e-01 75.7% 66.3%
3797513 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.75 60.0 3.81e-01 85.7% 30.0%
3961706 4.1.1.161 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4178 0.73 52.0 5.36e-01 72.9% 95.4%
5043697 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 51.0 5.35e-01 72.9% 80.0%
3737837 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 52.0 5.41e-01 74.3% 96.9%
5052257 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 49.0 5.28e-01 72.9% 81.7%
5042986 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 51.0 5.42e-01 72.9% 91.7%
3635578 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.72 61.0 4.02e-01 92.9% 41.2%
4936051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 50.0 5.52e-01 71.4% 92.7%
4021395 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.72 52.0 3.31e-01 75.7% 24.6%
4883261 4.1.1.76 ↗ beta barrels › SH3 › SH3 › SH3 › NdhO 0.72 57.0 5.10e-01 84.3% 84.2%
4161673 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.72 53.0 5.01e-01 82.9% 64.7%
3591144 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 60.0 4.61e-01 90.0% 97.3%
4241924 4.1.1.93 ↗ beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.72 49.0 4.52e-01 71.4% 56.7%
4069543 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.72 57.0 5.57e-01 88.6% 80.0%
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.71 61.0 6.15e-01 91.4% 94.3%
5004050 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.24e-01 87.1% 77.1%
2727964 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.71 54.0 5.78e-01 84.3% 94.9%
4030387 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.71 60.0 3.79e-01 92.9% 36.3%
3740208 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.71 56.0 5.79e-01 88.6% 92.3%
3837995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 51.0 5.57e-01 87.1% 96.4%
3702154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.46e-01 84.3% 80.0%
3410884 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.70 47.0 4.92e-01 70.0% 76.6%
3218647 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 48.0 4.81e-01 72.9% 90.0%
3917372 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.68 58.0 5.71e-01 92.9% 86.7%
3585492 4.1.1.103 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12 0.68 57.0 4.87e-01 91.4% 65.5%
5065184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 42.0 4.99e-01 75.7% 97.8%
4220608 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.67 51.0 5.04e-01 85.7% 77.3%
591 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.67 53.0 5.19e-01 85.7% 85.5%
3636503 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 54.0 5.42e-01 87.1% 95.7%
4422252 4.1.1.455 ↗ beta barrels › SH3 › SH3 › SH3 › DSRB 0.67 46.0 4.92e-01 72.9% 100.0%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 51.0 4.77e-01 81.4% 100.0%
3720660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 5.16e-01 85.7% 86.7%
3886139 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 56.0 5.81e-01 92.9% 98.5%
3738641 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.66 54.0 5.28e-01 91.4% 82.7%
4505316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 49.0 5.17e-01 82.9% 93.3%
3721062 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.65 53.0 5.05e-01 91.4% 91.8%
3995874 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 3.83e-01 80.0% 84.0%
3730229 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.65 53.0 5.19e-01 91.4% 81.3%
3399366 9.14.1.3 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › DUF7042 0.65 50.0 3.93e-01 81.4% 91.4%
3585510 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 45.0 4.28e-01 74.3% 74.1%
3638345 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 46.0 2.89e-01 81.4% 41.5%
3633533 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.61 50.0 3.26e-01 92.9% 30.4%
3919645 5.1.4.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.60 45.0 2.80e-01 81.4% 22.1%
3251170 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 42.0 4.22e-01 72.9% 90.0%
4600473 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.60 42.0 3.35e-01 72.9% 51.9%
3897981 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.58 46.0 3.01e-01 87.1% 33.0%
3163957 881.1.1.38 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27161 0.57 47.0 3.57e-01 91.4% 100.0%
3234660 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.57 43.0 2.97e-01 81.4% 26.4%
5049620 304.106.1.0 ↗ a+b two layers › Alpha-beta plaits › Hypothetical protein PH1602 › Hypothetical protein PH1602 0.56 47.0 2.90e-01 91.4% 76.7%
5039380 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 2.81e-01 87.1% 22.9%
3258441 234.3.1.0 ↗ a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.55 37.0 3.64e-01 70.0% 66.7%
3238942 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.55 44.0 2.85e-01 87.1% 30.5%
4003008 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.55 41.0 2.71e-01 80.0% 21.7%
3584918 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.55 44.0 2.95e-01 87.1% 37.8%
3930110 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 43.0 2.85e-01 87.1% 34.2%
3505584 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 43.0 2.83e-01 87.1% 36.8%
3237464 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 43.0 2.81e-01 87.1% 32.7%
3882821 2007.2.3.21 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK 0.54 43.0 2.84e-01 87.1% 37.7%
2803903 2007.2.3.21 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK 0.53 43.0 2.83e-01 87.1% 34.8%
3699353 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 41.0 2.63e-01 81.4% 18.8%
3243051 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 42.0 2.76e-01 87.1% 38.0%
4014377 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 47.0 2.88e-01 100.0% 85.6%
3230646 517.1.1.1 ↗ beta barrels › CBF-like › Core binding factor beta, CBF › Core binding factor beta, CBF › CBF_beta 0.52 40.0 3.46e-01 88.6% 57.5%
5034740 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.52 38.0 2.65e-01 80.0% 41.6%
3587866 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.52 37.0 2.62e-01 77.1% 39.2%
5037297 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.51 37.0 2.72e-01 80.0% 53.6%
3497765 247.1.1.9 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL 0.51 37.0 2.69e-01 78.6% 28.4%
5013540 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.51 37.0 2.60e-01 77.1% 34.1%
5045231 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.51 36.0 2.75e-01 77.1% 42.3%
4986344 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.63e-01 90.0% 97.1%
4950876 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.50 37.0 2.52e-01 81.4% 49.7%