←Back to structures
SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00172
Bact-VirSR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00172
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-75_88-159
Domain cluster:
rep: ACSJ01000019.1__EES90262.1__CLG_B2197__00003__D2-153
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09704.16 best | Cas_Cas5d | 71.4 | 1.60e-19 | 95.9% | 70.0% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kg4A00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.91 | 85.0 | 7.72e-01 | 99.3% | 77.2% |
| 3vzhA00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.86 | 80.0 | 7.13e-01 | 100.0% | 73.2% |
| 4n77A00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 64.0 | 5.75e-01 | 97.3% | 72.8% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.66 | 42.0 | 5.04e-01 | 95.9% | 96.9% |
| 2rhqB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.66 | 38.0 | 4.84e-01 | 96.6% | 100.0% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.66 | 42.0 | 5.06e-01 | 99.3% | 100.0% |
| 3nwrA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.64 | 45.0 | 5.00e-01 | 96.6% | 90.7% |
| 1qltA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.63 | 38.0 | 3.26e-01 | 97.3% | 37.2% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.60 | 40.0 | 4.58e-01 | 97.3% | 92.6% |
| 2wmfA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.59 | 26.0 | 2.85e-01 | 87.8% | 45.2% |
| 8c46A01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 4.56e-01 | 96.6% | 95.6% |
| 2v8hA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 4.61e-01 | 95.9% | 95.7% |
| 4mt1A02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.57 | 36.0 | 4.08e-01 | 96.6% | 87.4% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 4.55e-01 | 97.3% | 94.8% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 4.56e-01 | 95.9% | 95.7% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 40.0 | 4.45e-01 | 96.6% | 93.9% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 39.0 | 4.43e-01 | 95.9% | 96.4% |
| 6vfqA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.56 | 34.0 | 3.78e-01 | 95.2% | 76.3% |
| 4pxdA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 40.0 | 4.43e-01 | 96.6% | 93.9% |
| 3wmqA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 29.0 | 3.54e-01 | 88.4% | 76.6% |
| 4oleC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 33.0 | 3.62e-01 | 95.9% | 72.3% |
| 4pxeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 4.37e-01 | 95.2% | 94.9% |
| 2ebeA00 | 3.30.70.2290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF3208) | 0.53 | 37.0 | 4.19e-01 | 98.6% | 100.0% |
| 5dzxA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 31.0 | 3.50e-01 | 95.2% | 77.6% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.51 | 34.0 | 3.94e-01 | 95.2% | 98.0% |
| 3u83A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 29.0 | 3.35e-01 | 95.9% | 78.2% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4662659 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.93 | 88.0 | 7.42e-01 | 98.6% | 77.3% |
| 5083152 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.90 | 86.0 | 7.44e-01 | 100.0% | 80.0% |
| 1346899 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.88 | 84.0 | 7.17e-01 | 98.6% | 67.6% |
| 4996327 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.85 | 79.0 | 6.53e-01 | 97.3% | 97.1% |
| 5071665 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.82 | 76.0 | 6.25e-01 | 96.6% | 97.6% |
| 4946705 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.82 | 77.0 | 6.33e-01 | 98.6% | 89.8% |
| 3078808 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.82 | 76.0 | 6.63e-01 | 98.6% | 74.5% |
| 4583752 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.81 | 75.0 | 6.56e-01 | 96.6% | 77.1% |
| 5075411 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.81 | 74.0 | 6.42e-01 | 95.2% | 97.6% |
| 4200050 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.81 | 75.0 | 6.11e-01 | 98.0% | 98.0% |
| 5021424 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.80 | 76.0 | 6.38e-01 | 98.6% | 90.9% |
| 5077675 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.80 | 66.0 | 5.83e-01 | 95.9% | 62.3% |
| 4967166 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.78 | 72.0 | 5.96e-01 | 96.6% | 71.7% |
| 1488213 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.77 | 71.0 | 6.13e-01 | 98.6% | 80.8% |
| 5077966 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.77 | 70.0 | 5.82e-01 | 98.6% | 100.0% |
| 4944267 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.76 | 70.0 | 5.78e-01 | 96.6% | 63.1% |
| 4984491 | 304.139.1.0 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related | 0.74 | 67.0 | 6.31e-01 | 95.9% | 97.7% |
| 2388895 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.74 | 68.0 | 5.62e-01 | 97.3% | 68.4% |
| 4928785 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.74 | 68.0 | 5.80e-01 | 98.0% | 99.1% |
| 4989896 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.73 | 66.0 | 5.04e-01 | 95.9% | 100.0% |
| 5066096 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.73 | 67.0 | 5.77e-01 | 98.0% | 89.5% |
| 4989910 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.73 | 68.0 | 5.76e-01 | 98.0% | 96.9% |
| 4969691 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.72 | 65.0 | 5.43e-01 | 96.6% | 84.5% |
| 4969690 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.72 | 64.0 | 5.51e-01 | 97.3% | 84.3% |
| 5013690 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.71 | 65.0 | 5.76e-01 | 96.6% | 97.1% |
| 4929253 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.71 | 67.0 | 5.68e-01 | 98.6% | 88.4% |
| 5036240 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.71 | 65.0 | 5.43e-01 | 99.3% | 95.6% |
| 5009917 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.71 | 64.0 | 4.85e-01 | 98.6% | 87.2% |
| 4093127 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.70 | 64.0 | 5.33e-01 | 96.6% | 97.1% |
| 2428749 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.70 | 64.0 | 5.09e-01 | 98.6% | 91.3% |
| 5032167 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.70 | 65.0 | 5.57e-01 | 97.3% | 97.7% |
| 5009933 | 304.139.1.5 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Csc2 | 0.70 | 65.0 | 4.87e-01 | 100.0% | 74.4% |
| 5017732 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.70 | 64.0 | 5.15e-01 | 99.3% | 77.5% |
| 3603230 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.69 | 62.0 | 4.78e-01 | 98.0% | 94.1% |
| 2705952 | 304.139.1.3 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Cas_Cas7 | 0.68 | 63.0 | 5.02e-01 | 100.0% | 88.1% |
| 2984017 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.68 | 63.0 | 5.06e-01 | 99.3% | 89.1% |
| 4947504 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.68 | 61.0 | 5.44e-01 | 97.3% | 90.0% |
| 4933936 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.68 | 62.0 | 5.02e-01 | 98.6% | 89.8% |
| 5017739 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.68 | 61.0 | 5.10e-01 | 97.3% | 71.6% |
| 5013703 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.67 | 60.0 | 5.19e-01 | 95.2% | 97.3% |
| 5013689 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.67 | 61.0 | 4.65e-01 | 100.0% | 89.0% |
| 4278809 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.66 | 42.0 | 4.80e-01 | 95.2% | 88.6% |
| 4888465 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.64 | 55.0 | 4.27e-01 | 93.9% | 72.7% |
| 4331348 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.63 | 57.0 | 4.77e-01 | 96.6% | 94.2% |
| 5042927 | 304.51.1.22 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › PF29613 | 0.61 | 49.0 | 5.22e-01 | 94.6% | 95.4% |
| 4955641 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.61 | 39.0 | 4.65e-01 | 95.9% | 95.0% |
| 3979231 | 872.1.1.4 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › DUF4312 | 0.58 | 36.0 | 4.35e-01 | 76.2% | 94.7% |
| 4628096 | 304.51.1.22 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › PF29613 | 0.58 | 45.0 | 4.86e-01 | 93.9% | 97.6% |
| 5053336 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 34.0 | 3.99e-01 | 95.9% | 85.0% |
| 1780607 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 41.0 | 4.49e-01 | 95.9% | 95.7% |
| 5035678 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 35.0 | 3.85e-01 | 95.9% | 76.7% |
| 3497298 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.52 | 46.0 | 4.69e-01 | 95.9% | 98.6% |
| 3490645 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.52 | 46.0 | 4.74e-01 | 95.9% | 100.0% |
| 5055840 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.52 | 38.0 | 4.20e-01 | 95.9% | 97.4% |
| 3404106 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.51 | 36.0 | 3.78e-01 | 95.9% | 80.8% |
D2
medium
residues 160-213
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kg4A00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.81 | 61.0 | 4.10e-01 | 88.9% | 23.4% |
| 3vzhA00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 62.0 | 4.24e-01 | 100.0% | 26.3% |
| 4y4mC00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 46.0 | 2.96e-01 | 85.2% | 41.2% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.59 | 46.0 | 3.12e-01 | 90.7% | 58.4% |
| 3c0bA02 | 3.30.420.190 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › conserved archaeal protein q6m145 | 0.57 | 41.0 | 2.79e-01 | 79.6% | 62.3% |
| 3r7aB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.55 | 43.0 | 2.98e-01 | 94.4% | 97.8% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 3.03e-01 | 77.8% | 60.3% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.54 | 37.0 | 3.54e-01 | 92.6% | 57.7% |
| 1kgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 33.0 | 2.77e-01 | 85.2% | 34.7% |
| 2zadA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 40.0 | 3.33e-01 | 92.6% | 50.0% |
| 1kkeA02 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.52 | 39.0 | 3.08e-01 | 88.9% | 39.7% |
| 3bhcA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.52 | 39.0 | 3.12e-01 | 87.0% | 81.3% |
| 3ik4B01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 40.0 | 3.26e-01 | 92.6% | 47.5% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 3.19e-01 | 92.6% | 45.7% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.51 | 41.0 | 2.98e-01 | 94.4% | 92.6% |
| 2xzmE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 37.0 | 3.03e-01 | 94.4% | 37.9% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 37.0 | 2.96e-01 | 83.3% | 88.5% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 36.0 | 3.61e-01 | 94.4% | 75.9% |
| 4d8mA03 | 2.100.10.40 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › | 0.51 | 38.0 | 2.74e-01 | 88.9% | 69.3% |
| 5zceA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 31.0 | 2.85e-01 | 81.5% | 40.3% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 36.0 | 3.16e-01 | 81.5% | 69.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008748 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.70 | 47.0 | 3.68e-01 | 70.4% | 37.4% |
| 4938557 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 41.0 | 3.12e-01 | 85.2% | 25.3% |
| 4078175 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 43.0 | 3.74e-01 | 87.0% | 44.2% |
| 3996051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 45.0 | 4.25e-01 | 85.2% | 67.1% |
| 5078744 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 46.0 | 3.20e-01 | 92.6% | 22.8% |
| 3286861 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.60 | 47.0 | 3.36e-01 | 88.9% | 44.1% |
| 5076544 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 42.0 | 3.64e-01 | 79.6% | 46.3% |
| 3787569 | 220.1.1.43 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH | 0.58 | 42.0 | 3.33e-01 | 81.5% | 40.0% |
| 5043699 | 3509.1.1.0 ↗ | a+b complex topology › RapA C-terminal domain › RapA C-terminal domain › RapA C-terminal domain | 0.57 | 42.0 | 3.05e-01 | 87.0% | 45.3% |
| 3783573 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.35e-01 | 77.8% | 57.1% |
| 4391625 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.55 | 38.0 | 3.12e-01 | 85.2% | 36.4% |
| 4393617 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.55 | 44.0 | 3.48e-01 | 98.1% | 40.0% |
| 3933904 | 5.1.4.333 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF31099 | 0.55 | 44.0 | 2.68e-01 | 96.3% | 93.7% |
| 3930563 | 304.59.1.0 ↗ | a+b two layers › Alpha-beta plaits › MTH889-like › MTH889-like | 0.54 | 38.0 | 2.88e-01 | 74.1% | 72.5% |
| 3360403 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.53 | 35.0 | 3.62e-01 | 70.4% | 76.0% |
| 4269457 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 41.0 | 3.22e-01 | 96.3% | 38.1% |
| 3820548 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.52 | 37.0 | 2.87e-01 | 90.7% | 29.0% |
| 5032277 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.52 | 36.0 | 2.93e-01 | 83.3% | 33.6% |
| None | — | 0.51 | 41.0 | 2.57e-01 | 94.4% | 67.2% | |
| 3570680 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 35.0 | 2.13e-01 | 72.2% | 14.1% |
| 4027356 | 884.1.1.0 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain | 0.50 | 41.0 | 3.30e-01 | 98.1% | 43.2% |