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SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00195
Bact-VirSR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00195
Identity
- Kingdom:
- phage
Quality
83.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-114
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.57 | 38.0 | 4.05e-01 | 89.9% | 77.0% |
| 7ymiD01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.53 | 48.0 | 3.88e-01 | 97.0% | 81.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4153305 | 192.7.1.68 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › UPF0182 | 0.59 | 44.0 | 3.58e-01 | 77.8% | 72.4% |
| 3165061 | 1075.4.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane_2 | 0.57 | 49.0 | 3.41e-01 | 96.0% | 80.9% |
| 3503335 | 604.1.1.124 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 | 0.55 | 41.0 | 3.92e-01 | 77.8% | 82.6% |
| 3375713 | 604.1.1.3 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › MAP65_ASE1 | 0.53 | 43.0 | 3.98e-01 | 89.9% | 76.9% |