←Back to structures
SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00242
Bact-VirSR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00242
Identity
- Kingdom:
- phage
Quality
58.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-105
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a8eA00 | 3.30.930.20 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Protein of unknown function DUF1054 | 0.68 | 49.0 | 3.43e-01 | 76.6% | 35.2% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.68 | 48.0 | 4.72e-01 | 90.6% | 70.1% |
| 4d53A00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.66 | 57.0 | 4.54e-01 | 98.4% | 76.7% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.64 | 43.0 | 2.67e-01 | 100.0% | 13.8% |
| 1pwkA00 | 3.30.740.10 | Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 0.63 | 53.0 | 4.85e-01 | 98.4% | 84.6% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.62 | 48.0 | 4.28e-01 | 85.9% | 62.1% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.62 | 50.0 | 4.50e-01 | 92.2% | 87.2% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.61 | 44.0 | 4.09e-01 | 76.6% | 74.4% |
| 2e1bA02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.61 | 51.0 | 4.21e-01 | 100.0% | 96.1% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 44.0 | 4.08e-01 | 79.7% | 78.8% |
| 1wc1C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.60 | 48.0 | 3.51e-01 | 90.6% | 64.1% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.60 | 50.0 | 4.77e-01 | 96.9% | 88.3% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.60 | 43.0 | 3.99e-01 | 100.0% | 58.1% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 46.0 | 3.86e-01 | 100.0% | 48.3% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 45.0 | 3.71e-01 | 89.1% | 69.8% |
| 4ivkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 47.0 | 2.92e-01 | 92.2% | 62.4% |
| 1ka8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 4.13e-01 | 93.8% | 87.0% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.58 | 40.0 | 3.28e-01 | 98.4% | 35.3% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.58 | 41.0 | 3.71e-01 | 98.4% | 52.6% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.58 | 39.0 | 2.88e-01 | 70.3% | 98.9% |
| 1mhyD00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.57 | 45.0 | 2.79e-01 | 95.3% | 32.2% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 46.0 | 3.28e-01 | 90.6% | 94.2% |
| 2v1xA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.12e-01 | 100.0% | 95.5% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.58e-01 | 87.5% | 72.3% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.56 | 45.0 | 3.70e-01 | 95.3% | 77.6% |
| 2c7yA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 46.0 | 2.81e-01 | 90.6% | 25.3% |
| 3lmmA01 | 3.30.950.30 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain | 0.56 | 47.0 | 3.68e-01 | 100.0% | 82.1% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.92e-01 | 92.2% | 62.2% |
| 4clfA02 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.56 | 46.0 | 3.48e-01 | 100.0% | 66.8% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.55 | 42.0 | 4.07e-01 | 82.8% | 87.8% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 41.0 | 3.53e-01 | 81.2% | 49.5% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 45.0 | 3.80e-01 | 93.8% | 58.9% |
| 2v4jB03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 37.0 | 3.74e-01 | 100.0% | 70.8% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 45.0 | 3.82e-01 | 90.6% | 68.6% |
| 3bz6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 44.0 | 4.01e-01 | 92.2% | 86.7% |
| 3fveA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.54 | 43.0 | 3.46e-01 | 95.3% | 43.4% |
| 2e55A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 43.0 | 3.12e-01 | 92.2% | 93.8% |
| 3bs4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 3.04e-01 | 95.3% | 35.5% |
| 2esbA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 46.0 | 3.46e-01 | 98.4% | 61.7% |
| 6nazA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 40.0 | 3.09e-01 | 89.1% | 34.4% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.53 | 43.0 | 4.03e-01 | 98.4% | 96.5% |
| 3vu9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 2.91e-01 | 87.5% | 87.0% |
| 3ix3A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.52 | 39.0 | 2.99e-01 | 82.8% | 76.7% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.48e-01 | 100.0% | 56.5% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 30.0 | 2.91e-01 | 71.9% | 48.6% |
| 2p84A01 | 2.60.430.10 | Mainly Beta › Sandwich › YopX-like fold › YopX-like domain | 0.52 | 32.0 | 3.31e-01 | 70.3% | 65.0% |
| 1ds8M02 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.52 | 41.0 | 3.18e-01 | 95.3% | 36.7% |
| 2nq2D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 3.08e-01 | 100.0% | 83.9% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.65e-01 | 92.2% | 69.8% |
| 2xssA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 42.0 | 3.24e-01 | 95.3% | 80.1% |
| 3wp4A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.51 | 41.0 | 2.90e-01 | 90.6% | 48.7% |
| 2avdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 38.0 | 2.69e-01 | 84.4% | 32.4% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3238871 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.71 | 62.0 | 5.76e-01 | 98.4% | 98.8% |
| 3997010 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.71 | 60.0 | 5.59e-01 | 95.3% | 96.2% |
| 3496118 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.71 | 62.0 | 5.54e-01 | 98.4% | 86.7% |
| 4938054 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.70 | 48.0 | 4.51e-01 | 100.0% | 57.5% |
| 5067363 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.70 | 49.0 | 4.57e-01 | 100.0% | 58.7% |
| 1278602 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.69 | 45.0 | 4.66e-01 | 79.7% | 71.7% |
| 3481547 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.69 | 55.0 | 4.22e-01 | 89.1% | 64.7% |
| 3239403 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.69 | 59.0 | 5.28e-01 | 100.0% | 83.2% |
| 3999372 | 198.1.1.4 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 | 0.68 | 59.0 | 4.80e-01 | 98.4% | 91.2% |
| 3923243 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.68 | 59.0 | 5.35e-01 | 100.0% | 87.8% |
| 3620174 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.68 | 59.0 | 5.33e-01 | 100.0% | 85.6% |
| 2440220 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.68 | 45.0 | 4.68e-01 | 81.2% | 72.9% |
| 3224270 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.68 | 59.0 | 5.04e-01 | 98.4% | 74.3% |
| 3898704 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.67 | 48.0 | 4.19e-01 | 87.5% | 50.5% |
| 3939986 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.67 | 57.0 | 5.20e-01 | 100.0% | 87.8% |
| 3238923 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.66 | 53.0 | 3.12e-01 | 90.6% | 11.7% |
| 1507770 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.66 | 40.0 | 4.26e-01 | 71.9% | 70.4% |
| 3848891 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.66 | 48.0 | 4.12e-01 | 90.6% | 49.0% |
| 4880634 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.66 | 42.0 | 4.32e-01 | 81.2% | 69.5% |
| 3238177 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.66 | 54.0 | 4.89e-01 | 93.8% | 84.4% |
| 4087039 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 51.0 | 4.80e-01 | 100.0% | 68.8% |
| 3471144 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.65 | 56.0 | 5.17e-01 | 100.0% | 89.4% |
| 3574196 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.65 | 52.0 | 5.38e-01 | 93.8% | 100.0% |
| 4619882 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.64 | 44.0 | 4.11e-01 | 100.0% | 56.2% |
| 3473362 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 56.0 | 4.29e-01 | 98.4% | 82.8% |
| 3898070 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.64 | 46.0 | 4.48e-01 | 100.0% | 70.0% |
| 3926827 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.63 | 50.0 | 2.97e-01 | 92.2% | 28.6% |
| 2541233 | 3819.1.1.3 ↗ | alpha complex topology › CRISPR-associated endonuclease Cas9 alpha-helical lobe › CRISPR-associated endonuclease Cas9 alpha-helical lobe › CRISPR-associated endonuclease Cas9 alpha-helical lobe › Cas9_a | 0.63 | 43.0 | 2.65e-01 | 71.9% | 24.0% |
| 5067811 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.63 | 54.0 | 3.89e-01 | 96.9% | 62.1% |
| 5027134 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.62 | 52.0 | 4.18e-01 | 95.3% | 48.0% |
| 2037203 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.61 | 43.0 | 4.70e-01 | 92.2% | 94.1% |
| 1766108 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.60 | 40.0 | 3.94e-01 | 81.2% | 62.9% |
| 4525115 | 873.1.1.15 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27323 | 0.60 | 50.0 | 4.06e-01 | 95.3% | 66.2% |
| 3628907 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.60 | 49.0 | 2.70e-01 | 92.2% | 6.3% |
| 3394692 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 48.0 | 4.21e-01 | 95.3% | 94.3% |
| 3483771 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.59 | 43.0 | 3.90e-01 | 81.2% | 60.0% |
| 5065111 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.59 | 50.0 | 3.58e-01 | 100.0% | 47.1% |
| 5002173 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 42.0 | 3.80e-01 | 76.6% | 64.4% |
| 3494759 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 51.0 | 4.26e-01 | 100.0% | 90.4% |
| 3413597 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.59 | 44.0 | 2.85e-01 | 84.4% | 17.1% |
| 5049729 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 4.57e-01 | 93.8% | 78.7% |
| 3785490 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.58 | 46.0 | 3.67e-01 | 92.2% | 66.0% |
| 3938065 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 4.36e-01 | 90.6% | 76.0% |
| 3644266 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 4.27e-01 | 100.0% | 98.0% |
| 3788427 | 101.1.2.207 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH | 0.57 | 45.0 | 4.00e-01 | 90.6% | 80.0% |
| 4487383 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.57 | 43.0 | 3.84e-01 | 92.2% | 73.6% |
| 3940062 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.57 | 45.0 | 2.94e-01 | 90.6% | 28.9% |
| 4996620 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 4.23e-01 | 95.3% | 78.9% |
| 5078195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 4.47e-01 | 95.3% | 90.7% |
| 5021275 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 41.0 | 3.44e-01 | 78.1% | 54.5% |
| 3280392 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.56 | 38.0 | 4.18e-01 | 96.9% | 100.0% |
| 2834311 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.56 | 44.0 | 4.65e-01 | 90.6% | 98.3% |
| 4997605 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 40.0 | 3.48e-01 | 98.4% | 49.0% |
| 5026329 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 37.0 | 3.81e-01 | 85.9% | 73.3% |
| 1641233 | 4019.1.1.3 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.56 | 45.0 | 3.33e-01 | 89.1% | 34.9% |
| 4029392 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.56 | 39.0 | 2.79e-01 | 73.4% | 98.9% |
| 4969826 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 38.0 | 2.27e-01 | 70.3% | 28.8% |
| 3974731 | 601.52.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain › FlgK_D1 | 0.55 | 48.0 | 3.09e-01 | 100.0% | 34.1% |
| 4523274 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.55 | 39.0 | 2.91e-01 | 100.0% | 25.6% |
| 3741066 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.55 | 41.0 | 3.87e-01 | 82.8% | 71.2% |
| 3548774 | 4012.4.1.1 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins | 0.55 | 35.0 | 4.00e-01 | 79.7% | 91.1% |
| 4990157 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.55 | 45.0 | 3.76e-01 | 92.2% | 96.5% |
| 4995927 | 3715.1.1.0 ↗ | a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e | 0.55 | 45.0 | 4.13e-01 | 98.4% | 92.2% |
| 4048866 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.54 | 45.0 | 3.52e-01 | 95.3% | 42.7% |
| 3969345 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 42.0 | 3.01e-01 | 90.6% | 85.5% |
| 4998174 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.53 | 41.0 | 3.15e-01 | 92.2% | 40.0% |
| 5074925 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 44.0 | 3.66e-01 | 96.9% | 82.3% |
| 3960379 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.53 | 42.0 | 3.82e-01 | 93.8% | 62.2% |
| 141070 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.53 | 37.0 | 3.90e-01 | 90.6% | 86.0% |
| 5004772 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 39.0 | 3.56e-01 | 89.1% | 58.9% |
| 4467389 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.52 | 42.0 | 3.58e-01 | 90.6% | 60.9% |
| 3730465 | 101.1.2.281 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tfb2 | 0.52 | 44.0 | 2.80e-01 | 93.8% | 19.7% |
| 4973868 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 37.0 | 3.08e-01 | 76.6% | 43.7% |
| 312608 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.52 | 46.0 | 3.08e-01 | 100.0% | 83.9% |
| 4479016 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.51 | 43.0 | 3.72e-01 | 100.0% | 98.2% |
| 4672256 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.51 | 44.0 | 3.67e-01 | 98.4% | 82.6% |